RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 TMEM135Q86UB9 458 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 AMIGO1Q86WK6 493 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 LMNTD2Q8IXW0 634 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 CACNA2D3Q8IZS8 1091 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 SIDT2Q8NBJ9 832 aaKnown RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 PHC3Q8NDX5 983 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 OR5AR1Q8NGP9 310 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 LKAAEAR1Q8TD35 194 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 LPGAT1Q92604 370 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 OR6C1Q96RD1 312 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 PDE7BQ9NP56 450 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 CDYLQ9Y232 598 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.44■□□□□ 0.06
DDX54-204ENST00000546898 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
DDX54-204ENST00000546898 SNRNP200O75643 2136 aaKnown RBP15.44■□□□□ 0.06
DDX54-204ENST00000546898 H3BMM5 538 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 BTN3A1O00481 513 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 EFSO43281 561 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 USP1O94782 785 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 MAP4P27816 1152 aaKnown RBP15.43■□□□□ 0.06
DDX54-204ENST00000546898 AOAHP28039 575 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 PTGIRP43119 386 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 EIF3BP55884 814 aaKnown RBP15.43■□□□□ 0.06
DDX54-204ENST00000546898 HSD11B2P80365 405 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 HSPA14Q0VDF9 509 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 TUBB3Q13509 450 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDX54-204ENST00000546898 UNC5DQ6UXZ4 953 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 NAPRTQ6XQN6 538 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 VASH2Q86V25 355 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 BPHLQ86WA6 291 aaPredicted RBP15.43■□□□□ 0.06
DDX54-204ENST00000546898 PPP1R3BQ86XI6 285 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 NLGN4XQ8N0W4 816 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 D2HGDHQ8N465 521 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 IL22RA1Q8N6P7 574 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 ZSCAN1Q8NBB4 408 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 LSM14AQ8ND56 463 aaKnown RBP15.43■□□□□ 0.06
DDX54-204ENST00000546898 NLGN4YQ8NFZ3 816 aaPredicted RBP15.43■□□□□ 0.06
DDX54-204ENST00000546898 SIGLEC10Q96LC7 697 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 FCRL4Q96PJ5 515 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 C1GALT1Q9NS00 363 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 INTS10Q9NVR2 710 aaKnown RBP15.43■□□□□ 0.06
DDX54-204ENST00000546898 ICKQ9UPZ9 632 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 BTRCQ9Y297 605 aa15.43■□□□□ 0.06
DDX54-204ENST00000546898 ZCWPW2A0A1B0GU75 182 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 GSAPA4D1B5 854 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 IQCF5A8MTL0 148 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 C2orf74A8MZ97 194 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 GOLGA8KD6RF30 607 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 GOLGA8TH3BQL2 631 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 ERVH48-1M5A8F1 160 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 SMAPO00193 183 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 BTN3A3O00478 584 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 SLCO2B1O94956 709 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 ESR1P03372 595 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 CDH3P22223 829 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 CSE1LP55060 971 aaKnown RBP15.42■□□□□ 0.06
DDX54-204ENST00000546898 ABHD18Q0P651 414 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 PRKG2Q13237 762 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 THOC5Q13769 683 aaKnown RBP15.42■□□□□ 0.06
DDX54-204ENST00000546898 CTSL3PQ5NE16 218 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 PLEKHS1Q5SXH7 462 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 TMTC4Q5T4D3 741 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 IZUMO3Q5VZ72 239 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 NEPROQ6NW34 567 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 CILP2Q8IUL8 1156 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 RASGRP3Q8IV61 690 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 ADGRF3Q8IZF5 1079 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 KRT222Q8N1A0 295 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 ESX1Q8N693 406 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 GSDMBQ8TAX9 411 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 BIRC8Q96P09 236 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 EFHD1Q9BUP0 239 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 PITPNM3Q9BZ71 974 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 ULBP3Q9BZM4 244 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 RARRES3Q9UL19 164 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 MRFAP1Q9Y605 127 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 MAD1L1Q9Y6D9 718 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 MGAQ8IWI9 3026 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 BAHCC1Q9P281 2608 aa15.42■□□□□ 0.06
DDX54-204ENST00000546898 ATXN7O15265 892 aaPredicted RBP15.41■□□□□ 0.06
DDX54-204ENST00000546898 EBLN1P0CF75 366 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 PRDX3P30048 256 aaKnown RBP15.41■□□□□ 0.06
DDX54-204ENST00000546898 TUBB4BP68371 445 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 DR1Q01658 176 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 TUBB2AQ13885 445 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 MORF4L2Q15014 288 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 LONRF1Q17RB8 773 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 ZNF470Q6ECI4 717 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 CENPUQ71F23 418 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 OTOAQ7RTW8 1153 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 VRK3Q8IV63 474 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 DCUN1D3Q8IWE4 304 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 KLHL7Q8IXQ5 586 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 OR8K5Q8NH50 307 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 CALML6Q8TD86 181 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 KIAA1143Q96AT1 154 aaPredicted RBP15.41■□□□□ 0.06
DDX54-204ENST00000546898 STAMBPL1Q96FJ0 436 aa15.41■□□□□ 0.06
DDX54-204ENST00000546898 TRIM56Q9BRZ2 755 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms