RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FAM45AQ8TCE6 357 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 CD200R1Q8TD46 325 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 NCSTNQ92542 709 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 GATA6Q92908 595 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 FOPNLQ96NB1 174 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 GPR21Q99679 349 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 CPNE1Q99829 537 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 RHOXF2Q9BQY4 288 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 TMEM121BQ9BXQ6 578 aaPredicted RBP14.08□□□□□ -0.16
DDX54-203ENST00000546869 RHOJQ9H4E5 214 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 SEMA5BQ9P283 1151 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 DKK4Q9UBT3 224 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 PCDHGA8Q9Y5G5 932 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 PSAT1Q9Y617 370 aa14.08□□□□□ -0.16
DDX54-203ENST00000546869 PTPRBP23467 1997 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 CCDC187A0A096LP49 1063 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 OR5K3A6NET4 321 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 F7P08709 466 aaPredicted RBP14.07□□□□□ -0.16
DDX54-203ENST00000546869 TPBGLP0DKB5 382 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 MPC1LP0DKB6 136 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 FDXRP22570 491 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 TNFRSF8P28908 595 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 PHBP35232 272 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 MLLT3P42568 568 aaPredicted RBP14.07□□□□□ -0.16
DDX54-203ENST00000546869 LSSP48449 732 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 ABRQ12979 859 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 ACSBG2Q5FVE4 666 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 HECTD2Q5U5R9 776 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 TTC23LQ6PF05 361 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 CYHR1Q6ZMK1 362 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 B3GNT8Q7Z7M8 397 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 DCUN1D3Q8IWE4 304 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 LSMEM2Q8N112 164 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 SIDT2Q8NBJ9 832 aaKnown RBP14.07□□□□□ -0.16
DDX54-203ENST00000546869 FBXO15Q8NCQ5 510 aaPredicted RBP14.07□□□□□ -0.16
DDX54-203ENST00000546869 OR5AR1Q8NGP9 310 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 GIMAP7Q8NHV1 300 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 MAGEC3Q8TD91 643 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 FBF1Q8TES7 1133 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 LCN9Q8WX39 176 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 RAD51AP1Q96B01 352 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 ATXN7L3BQ96GX2 97 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 SLC30A3Q99726 388 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 B3GNT4Q9C0J1 378 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 SEMA6CQ9H3T2 930 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 SRMSQ9H3Y6 488 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 SYNDIG1Q9H7V2 258 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 POLR1BQ9H9Y6 1135 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 NINJ2Q9NZG7 142 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 OR6C2Q9NZP2 312 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 NFU1Q9UMS0 254 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 KNTC1P50748 2209 aa14.07□□□□□ -0.16
DDX54-203ENST00000546869 TRABD2BA6NFA1 517 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 CAPN5O15484 640 aaPredicted RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 PSIP1O75475 530 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 DXOO77932 396 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 C1orf105O95561 183 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 TYRP1P17643 537 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 SHMT2P34897 504 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 DEKP35659 375 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 GP5P40197 560 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 CDKN2DP55273 166 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 GRB7Q14451 532 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 PLCL1Q15111 1095 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 KLHL38Q2WGJ6 581 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 KBTBD12Q3ZCT8 623 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 RBM20Q5T481 1227 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 GRTP1Q5TC63 336 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 CAPN12Q6ZSI9 719 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 PRSS42Q7Z5A4 293 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 AMIGO1Q86WK6 493 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 OOSP2Q86WS3 158 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 OR4E2Q8NGC2 313 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 ASB11Q8WXH4 323 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 RSC1A1Q92681 617 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 PDLIM5Q96HC4 596 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 CYTH2Q99418 400 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 CD180Q99467 661 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 NDNQ99608 321 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 CMKLR1Q99788 373 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 MENTQ9BUN1 341 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 CDC42EP4Q9H3Q1 356 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 POPDC3Q9HBV1 291 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 HRASLS2Q9NWW9 162 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 TXNDC16Q9P2K2 825 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 SLC17A6Q9P2U8 582 aa14.06□□□□□ -0.16
DDX54-203ENST00000546869 TRMT6Q9UJA5 497 aaKnown RBP14.06□□□□□ -0.16
DDX54-203ENST00000546869 OR6C74A6NCV1 312 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 GFYI3L273 518 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 SLU7O95391 586 aaKnown RBP14.05□□□□□ -0.16
DDX54-203ENST00000546869 CAPNS1P04632 268 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 SPRP35270 261 aaPredicted RBP14.05□□□□□ -0.16
DDX54-203ENST00000546869 RGS4P49798 205 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 POU4F1Q01851 419 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 PRKG2Q13237 762 aa14.05□□□□□ -0.16
DDX54-203ENST00000546869 TRMT10CQ7L0Y3 403 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms