RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ADAMTS20P59510 1910 aa11.54□□□□□ -0.56
YBX3-217ENST00000546164 CACNA1GO43497 2377 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 IGHV5-51A0A0C4DH38 117 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 UBA6A0AVT1 1052 aaPredicted RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 POLR1CO15160 346 aaPredicted RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 TTI1O43156 1089 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 SEC31AO94979 1220 aaKnown RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 TTC4O95801 387 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 ITGB6P18564 788 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 CASQ1P31415 396 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 SEPHS1P49903 392 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 EIF3BP55884 814 aaKnown RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 TMPRSS3P57727 454 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 HSPA14Q0VDF9 509 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 CBLBQ13191 982 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 THOC5Q13769 683 aaKnown RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 GBX1Q14549 363 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 IL11RAQ14626 422 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 BRD3Q15059 726 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 TMED2Q15363 201 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 LONRF1Q17RB8 773 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 PLEKHS1Q5SXH7 462 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 HIBCHQ6NVY1 386 aaPredicted RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 ARMC6Q6NXE6 501 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 UNC5DQ6UXZ4 953 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 NAPRTQ6XQN6 538 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 AMIGO1Q86WK6 493 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 ZFAND4Q86XD8 727 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 PHC3Q8NDX5 983 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 OR4E2Q8NGC2 313 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 OR5AR1Q8NGP9 310 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 CALML6Q8TD86 181 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 CRELD1Q96HD1 420 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 EBNA1BP2Q99848 306 aaKnown RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 HGH1Q9BTY7 390 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 PITPNM3Q9BZ71 974 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 LATS2Q9NRM7 1088 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 BTRCQ9Y297 605 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 TMEM184BQ9Y519 407 aaPredicted RBP11.53□□□□□ -0.56
YBX3-217ENST00000546164 PCDHB11Q9Y5F2 797 aa11.53□□□□□ -0.56
YBX3-217ENST00000546164 BTN3A3O00478 584 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 NDC80O14777 642 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 TP73O15350 636 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 KDM1AO60341 852 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 ZBTB11O95625 1053 aaPredicted RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 S1PR4O95977 384 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 RPN2P04844 631 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 FGF5P12034 268 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 PKMP14618 531 aaKnown RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 POLR2CP19387 275 aaPredicted RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 ATP5DP30049 168 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 FMO4P31512 558 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 SHMT2P34897 504 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 KPNA2P52292 529 aaKnown RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 SH3BP2P78314 561 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 DHX9Q08211 1270 aaKnown RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 PRKG2Q13237 762 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 CRYMQ14894 314 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 TGIF1Q15583 401 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 MSS51Q4VC12 460 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 ZNF470Q6ECI4 717 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 CYB5D1Q6P9G0 228 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 SYT10Q6XYQ8 523 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 OTOAQ7RTW8 1153 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 BPHLQ86WA6 291 aaPredicted RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 DCUN1D3Q8IWE4 304 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 ADGRF3Q8IZF5 1079 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 PDIK1LQ8N165 341 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
YBX3-217ENST00000546164 LRRC39Q96DD0 335 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 SNF8Q96H20 258 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 OR6C1Q96RD1 312 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 CCNL2Q96S94 520 aaPredicted RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 KRT12Q99456 494 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 APMAPQ9HDC9 416 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 C20orf96Q9NUD7 363 aaPredicted RBP11.52□□□□□ -0.57
YBX3-217ENST00000546164 IL1RAPL1Q9NZN1 696 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 OR6C2Q9NZP2 312 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 KLHL42Q9P2K6 505 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 PILRAQ9UKJ1 303 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 ICKQ9UPZ9 632 aa11.52□□□□□ -0.57
YBX3-217ENST00000546164 SDK2Q58EX2 2172 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 SMG1Q96Q15 3661 aaKnown RBP11.51□□□□□ -0.57
YBX3-217ENST00000546164 FAM187AA6NFU0 413 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 C2orf74A8MZ97 194 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 K7ENP7 123 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 BTN3A1O00481 513 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 NIPSNAP2O75323 286 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 DLGAP3O95886 979 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 MSL3P1P0C860 447 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 TPBGLP0DKB5 382 aa11.51□□□□□ -0.57
YBX3-217ENST00000546164 PRDX3P30048 256 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms