RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 TRIM54Q9BYV2 358 aa17.03■□□□□ 0.32
CD9-211ENST00000546073 TFB2MQ9H5Q4 396 aaKnown RBP17.03■□□□□ 0.32
CD9-211ENST00000546073 CCDC86Q9H6F5 360 aaKnown RBP17.03■□□□□ 0.32
CD9-211ENST00000546073 L2HGDHQ9H9P8 463 aa17.03■□□□□ 0.32
CD9-211ENST00000546073 SYTL2Q9HCH5 934 aa17.03■□□□□ 0.32
CD9-211ENST00000546073 VWA7Q9Y334 891 aa17.03■□□□□ 0.32
CD9-211ENST00000546073 DHRS7Q9Y394 339 aa17.03■□□□□ 0.32
CD9-211ENST00000546073 ENTPD2Q9Y5L3 495 aa17.03■□□□□ 0.32
CD9-211ENST00000546073 GSAPA4D1B5 854 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 TMEM8BA6NDV4 472 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 A8MU76 341 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 C2orf74A8MZ97 194 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 BHMG1C9JSJ3 638 aaPredicted RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 PLD2O14939 933 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 TP73O15350 636 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 CAPN5O15484 640 aaPredicted RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 HIST1H2AGP0C0S8 130 aaPredicted RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 HIST1H2ADP20671 130 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 SPRP35270 261 aaPredicted RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 MLLT3P42568 568 aaPredicted RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 LSSP48449 732 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 CLDN6P56747 220 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 GABREP78334 506 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 TMTC4Q5T4D3 741 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 NEK10Q6ZWH5 1172 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 TAOK1Q7L7X3 1001 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 SIDT2Q8NBJ9 832 aaKnown RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 OR52E1Q8NGJ3 308 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 UBXN4Q92575 508 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 HIST1H2AHQ96KK5 128 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 CYTH2Q99418 400 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 GPR21Q99679 349 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 HIST1H2AJQ99878 128 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 H2AFJQ9BTM1 129 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 RAB33BQ9H082 229 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 THSD1Q9NS62 852 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 EPHA6Q9UF33 1036 aa17.02■□□□□ 0.32
CD9-211ENST00000546073 TSR3Q9UJK0 312 aaKnown RBP17.02■□□□□ 0.32
CD9-211ENST00000546073 IGHV5-10-1A0A0J9YXX1 117 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 TCRBV9S1A1TA0A576 114 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 OR5K3A6NET4 321 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 SLU7O95391 586 aaKnown RBP17.01■□□□□ 0.31
CD9-211ENST00000546073 MPC1LP0DKB6 136 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 MCM3P25205 808 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 ACADLP28330 430 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 HSD17B2P37059 387 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 GP5P40197 560 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 IL2P60568 153 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 ZFP36L1Q07352 338 aaKnown RBP17.01■□□□□ 0.31
CD9-211ENST00000546073 TRADDQ15628 312 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 KLHL38Q2WGJ6 581 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 ZNF789Q5FWF6 425 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 GRTP1Q5TC63 336 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 HECTD2Q5U5R9 776 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 CACHD1Q5VU97 1274 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 FAM129CQ86XR2 697 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 PPM1NQ8N819 430 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 OR5AR1Q8NGP9 310 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 LKAAEAR1Q8TD35 194 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 NDNQ99608 321 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 SEMA6CQ9H3T2 930 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 ZDHHC18Q9NUE0 388 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 OR6C2Q9NZP2 312 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 NFU1Q9UMS0 254 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 SATB2Q9UPW6 733 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 LOXL2Q9Y4K0 774 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 PCDHB11Q9Y5F2 797 aa17.01■□□□□ 0.31
CD9-211ENST00000546073 PIPSLA2A3N6 862 aa17■□□□□ 0.31
CD9-211ENST00000546073 POLR2CP19387 275 aaPredicted RBP17■□□□□ 0.31
CD9-211ENST00000546073 CYP2A7P20853 494 aa17■□□□□ 0.31
CD9-211ENST00000546073 CDH3P22223 829 aa17■□□□□ 0.31
CD9-211ENST00000546073 MPSTP25325 297 aa17■□□□□ 0.31
CD9-211ENST00000546073 CLCN7P51798 805 aa17■□□□□ 0.31
CD9-211ENST00000546073 KYNUQ16719 465 aa17■□□□□ 0.31
CD9-211ENST00000546073 ZNF658BQ4V348 819 aaPredicted RBP17■□□□□ 0.31
CD9-211ENST00000546073 UNQ6494/PRO21346Q6UXR6 183 aa17■□□□□ 0.31
CD9-211ENST00000546073 CNPY4Q8N129 248 aa17■□□□□ 0.31
CD9-211ENST00000546073 CARFQ8N187 725 aa17■□□□□ 0.31
CD9-211ENST00000546073 NKAPQ8N5F7 415 aaKnown RBP17■□□□□ 0.31
CD9-211ENST00000546073 MCOLN3Q8TDD5 553 aa17■□□□□ 0.31
CD9-211ENST00000546073 FBF1Q8TES7 1133 aa17■□□□□ 0.31
CD9-211ENST00000546073 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17■□□□□ 0.31
CD9-211ENST00000546073 CCDC77Q9BR77 488 aa17■□□□□ 0.31
CD9-211ENST00000546073 RHOJQ9H4E5 214 aa17■□□□□ 0.31
CD9-211ENST00000546073 LRRC4CQ9HCJ2 640 aa17■□□□□ 0.31
CD9-211ENST00000546073 PCDHGA8Q9Y5G5 932 aa17■□□□□ 0.31
CD9-211ENST00000546073 ARID1BQ8NFD5 2236 aaPredicted RBP17■□□□□ 0.31
CD9-211ENST00000546073 GOLGA4Q13439 2230 aaKnown RBP16.99■□□□□ 0.31
CD9-211ENST00000546073 PRAMEF33A0A0G2JMD5 474 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 FAM95CA0A1B0GW59 222 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 ISM1B1AKI9 464 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 SYF2O95926 243 aaKnown RBP16.99■□□□□ 0.31
CD9-211ENST00000546073 MPOP05164 745 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 THRAP10827 490 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 HOXB3P14651 431 aaPredicted RBP16.99■□□□□ 0.31
CD9-211ENST00000546073 CD9P21926 228 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 RAB28P51157 221 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 RAB15P59190 212 aa16.99■□□□□ 0.31
CD9-211ENST00000546073 POU4F1Q01851 419 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms