RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 RALYQ9UKM9 306 aaKnown RBP15.28■□□□□ 0.04
CCDC78-216ENST00000544996 DSPP15924 2871 aaKnown RBP15.28■□□□□ 0.04
CCDC78-216ENST00000544996 C2orf74A8MZ97 194 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 K7ENP7 123 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 SMAPO00193 183 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 GPC4O75487 556 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 USP1O94782 785 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 SLCO2B1O94956 709 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 ZBTB11O95625 1053 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 ESR1P03372 595 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 MAP4P27816 1152 aaKnown RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 CASQ1P31415 396 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 FMO4P31512 558 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 SHMT2P34897 504 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 KPNA2P52292 529 aaKnown RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 ADARP55265 1226 aaKnown RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 ACY1Q03154 408 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 LONRF1Q17RB8 773 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 ZNF470Q6ECI4 717 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 BPHLQ86WA6 291 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 RASGRP3Q8IV61 690 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 LMNTD2Q8IXW0 634 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 CACNA2D3Q8IZS8 1091 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 CALML6Q8TD86 181 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 LPGAT1Q92604 370 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 NKD1Q969G9 470 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 TRIM56Q9BRZ2 755 aaKnown RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 NAT9Q9BTE0 207 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 C20orf96Q9NUD7 363 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 INTS10Q9NVR2 710 aaKnown RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 PILRAQ9UKJ1 303 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 POMT2Q9UKY4 750 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 CRYL1Q9Y2S2 319 aa15.27■□□□□ 0.04
CCDC78-216ENST00000544996 TDRKHQ9Y2W6 561 aaKnown RBP15.27■□□□□ 0.04
CCDC78-216ENST00000544996 LAMA5O15230 3695 aa15.27■□□□□ 0.03
CCDC78-216ENST00000544996 ZCWPW2A0A1B0GU75 182 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 BTN3A3O00478 584 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 RAD1O60671 282 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 STK17BO94768 372 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 TTC4O95801 387 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 FGF5P12034 268 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 PGAM1P18669 254 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 CDH3P22223 829 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 PRDX3P30048 256 aaKnown RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 ABRQ12979 859 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 TUBB3Q13509 450 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 MORF4L2Q15014 288 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 CTSL3PQ5NE16 218 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 TTC23LQ6PF05 361 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 UNC5DQ6UXZ4 953 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 VASH2Q86V25 355 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 PPP1R3BQ86XI6 285 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 NLGN4XQ8N0W4 816 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 PDIK1LQ8N165 341 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 NLGN4YQ8NFZ3 816 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 CFAP61Q8NHU2 1237 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 GABPB2Q8TAK5 448 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 LKAAEAR1Q8TD35 194 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 SNRNP27Q8WVK2 155 aaKnown RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 SKA2Q8WVK7 121 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 ELMO2Q96JJ3 720 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 BIRC8Q96P09 236 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 ULBP3Q9BZM4 244 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 CCDC68Q9H2F9 335 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 XKR8Q9H6D3 395 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 C1GALT1Q9NS00 363 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 SOHLH2Q9NX45 425 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 OR6C2Q9NZP2 312 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 RARRES3Q9UL19 164 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 CDYLQ9Y232 598 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 TMEM184BQ9Y519 407 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-216ENST00000544996 MRFAP1Q9Y605 127 aa15.26■□□□□ 0.03
CCDC78-216ENST00000544996 ZFHX4Q86UP3 3567 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 PIPSLA2A3N6 862 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 E5RI56 91 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 BTN3A1O00481 513 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 NDC80O14777 642 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FANCGO15287 622 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 TTI1O43156 1089 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FOLR1P15328 257 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 CHRM3P20309 590 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 IVDP26440 423 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 KCNAB1Q14722 419 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.25■□□□□ 0.03
CCDC78-216ENST00000544996 PLEKHS1Q5SXH7 462 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 UNC5AQ6ZN44 842 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 CENPUQ71F23 418 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 VRK3Q8IV63 474 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 ADGRF3Q8IZF5 1079 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 C17orf53Q8N3J3 647 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-216ENST00000544996 D2HGDHQ8N465 521 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 KIAA1143Q96AT1 154 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FOPNLQ96NB1 174 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FCRL4Q96PJ5 515 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 UBL7Q96S82 380 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-216ENST00000544996 KRT12Q99456 494 aa15.25■□□□□ 0.03
CCDC78-216ENST00000544996 FAM167BQ9BTA0 163 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms