RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SIGLEC14Q08ET2 396 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 EEF1AKMT2Q5JPI9 291 aaKnown RBP29.71■■■□□ 2.35
CCM2-219ENST00000544363 ABI3BPQ7Z7G0 1075 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 UHRF1Q96T88 793 aaPredicted RBP29.71■■■□□ 2.35
CCM2-219ENST00000544363 WWP1Q9H0M0 922 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 STN1Q9H668 368 aaKnown RBP29.71■■■□□ 2.35
CCM2-219ENST00000544363 TNFRSF12AQ9NP84 129 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 KLC4Q9NSK0 619 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 DNAJC28Q9NX36 388 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 GPSM3Q9Y4H4 160 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 A0A1W2PPC4 97 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 K7ESF4 209 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 HDAC3O15379 428 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 TPRG1LQ5T0D9 272 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 MAMSTRQ6ZN01 415 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 PDZD3Q86UT5 571 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 FBXO15Q8NCQ5 510 aaPredicted RBP29.7■■■□□ 2.34
CCM2-219ENST00000544363 PCED1AQ9H1Q7 454 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 MID1IP1Q9NPA3 183 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 ACSL5Q9ULC5 683 aa29.7■■■□□ 2.34
CCM2-219ENST00000544363 C1orf105O95561 183 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 BDKRB1P46663 353 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 GNPDA1P46926 289 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 RABIFP47224 123 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 THOP1P52888 689 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 IFT88Q13099 833 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 CWF19L1Q69YN2 538 aaKnown RBP29.69■■■□□ 2.34
CCM2-219ENST00000544363 TTC23LQ6PF05 361 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 Q6ZSR6 202 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 AFAP1L2Q8N4X5 818 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 AGAP11Q8TF27 550 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 OR1E3Q8WZA6 343 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 FAR2Q96K12 515 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 NECAB3Q96P71 396 aaPredicted RBP29.69■■■□□ 2.34
CCM2-219ENST00000544363 ZDHHC5Q9C0B5 715 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 DLGAP2Q9P1A6 1054 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 OPTCQ9UBM4 332 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 TRAF6Q9Y4K3 522 aa29.69■■■□□ 2.34
CCM2-219ENST00000544363 ZFC3H1O60293 1989 aaKnown RBP29.68■■■□□ 2.34
CCM2-219ENST00000544363 TMEM233B4DJY2 109 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 TNFRSF10CO14798 259 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 CCNT2O60583 730 aaKnown RBP29.68■■■□□ 2.34
CCM2-219ENST00000544363 GTF2H2Q13888 395 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 GTF2H2CQ6P1K8 395 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 UNC5DQ6UXZ4 953 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 GOLGA7Q7Z5G4 137 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 SNX19Q92543 992 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 FBXL8Q96CD0 374 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 CCDC138Q96M89 665 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 EBF4Q9BQW3 602 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 ORAI3Q9BRQ5 295 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 CARS2Q9HA77 564 aaKnown RBP29.68■■■□□ 2.34
CCM2-219ENST00000544363 INVSQ9Y283 1065 aa29.68■■■□□ 2.34
CCM2-219ENST00000544363 AXIN1O15169 862 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 STK16O75716 305 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 FGF4P08620 206 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 GDF5P43026 501 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 IDH3AP50213 366 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 RBBP7Q16576 425 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 EPGNQ6UW88 154 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 TRPM8Q7Z2W7 1104 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 SPDYE1Q8NFV5 336 aaPredicted RBP29.67■■■□□ 2.34
CCM2-219ENST00000544363 CADM4Q8NFZ8 388 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 OR2M4Q96R27 311 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 PRR19A6NJB7 356 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 METTL12A8MUP2 240 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 K7EPI3 171 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 DCTN3O75935 186 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 PDGFBP01127 241 aaPredicted RBP29.67■■■□□ 2.34
CCM2-219ENST00000544363 CCSMST1Q4G0I0 132 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 CLYBLQ8N0X4 340 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 TEX9Q8N6V9 391 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 OR13H1Q8NG92 308 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 MAPK15Q8TD08 544 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 EDAQ92838 391 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 PDXPQ96GD0 296 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 HEY2Q9UBP5 337 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 PLEKHM1Q9Y4G2 1056 aa29.67■■■□□ 2.34
CCM2-219ENST00000544363 KRT87PA6NCN2 255 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 CCT8L1PA6NM43 557 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 PI15O43692 258 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 ZXDCQ2QGD7 858 aaPredicted RBP29.66■■■□□ 2.34
CCM2-219ENST00000544363 VWA5B1Q5TIE3 1220 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 ATL1Q8WXF7 558 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 SPACA7Q96KW9 195 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 ZNF382Q96SR6 550 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 PKP4Q99569 1192 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 NOL11Q9H8H0 719 aaKnown RBP29.66■■■□□ 2.34
CCM2-219ENST00000544363 ABCF3Q9NUQ8 709 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 KLQ9UEF7 1012 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 PSMD13Q9UNM6 376 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 APOBEC2Q9Y235 224 aaKnown RBP29.66■■■□□ 2.34
CCM2-219ENST00000544363 KCNK6Q9Y257 313 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 FIS1Q9Y3D6 152 aa29.66■■■□□ 2.34
CCM2-219ENST00000544363 DIAPH2O60879 1101 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 ESRRBO95718 433 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 SLC6A12P48065 614 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 FAM174AQ8TBP5 190 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 RILPQ96NA2 401 aa29.65■■■□□ 2.34
CCM2-219ENST00000544363 NUF2Q9BZD4 464 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms