RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PSMC3IPQ9P2W1 217 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TBK1Q9UHD2 729 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NFS1Q9Y697 457 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PCNX2A6NKB5 2137 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 IQANK1A0A1B0GTG1 560 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 HMX2A2RU54 273 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GIPC1O14908 333 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RFPL3O75679 317 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KCNK5O95279 499 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GP1BAP07359 652 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SNRPAP09012 282 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CRABP2P29373 138 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MAPK9P45984 424 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SLCO1A2P46721 670 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZKSCAN8Q15776 578 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TMEM207Q6UWW9 146 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NKAPQ8N5F7 415 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 JPH3Q8WXH2 748 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 AHCYL2Q96HN2 611 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TBC1D10AQ9BXI6 508 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZMYND15Q9H091 742 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ABCG4Q9H172 646 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SNX15Q9NRS6 342 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 POLG2Q9UHN1 485 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PLAAQ9Y263 795 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 WDR87Q6ZQQ6 2873 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TLDC2A0PJX2 215 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TRIM49D1C9J1S8 452 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KDM1AO60341 852 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MATN4O95460 622 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CCDC166P0CW27 439 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GPR3P46089 330 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 BDKRB1P46663 353 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 OR1D5P58170 312 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 AMZ1Q400G9 498 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TAF1BQ53T94 588 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CYHR1Q6ZMK1 362 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZNF438Q7Z4V0 828 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 DCUN1D3Q8IWE4 304 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MAGEC3Q8TD91 643 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 EPS8L3Q8TE67 593 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ANKRD49Q8WVL7 239 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZFPM2Q8WW38 1151 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KIR3DX1Q9H7L2 352 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 UCK1Q9HA47 277 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ARGLU1Q9NWB6 273 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CTNNAL1Q9UBT7 734 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TLK1Q9UKI8 766 aa14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 APOBEC2Q9Y235 224 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZNF292O60281 2723 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RP1P56715 2156 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 LILRA5A6NI73 299 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RASGRF2O14827 1237 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZBTB14O43829 449 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 C1orf105O95561 183 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CATP04040 527 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ALDOAP04075 364 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RPLP0P05388 317 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 FTH1P19P0C7X4 201 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 AMD1P17707 334 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MAP4P27816 1152 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CCNFP41002 786 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 EPHA4P54764 986 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ILKQ13418 452 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CSHL1Q14406 222 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 UBE2R2Q712K3 238 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SPRED1Q7Z699 444 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TBC1D1Q86TI0 1168 aaPredicted RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SPATA6LQ8N4H0 392 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 OR52E1Q8NGJ3 308 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 OR10G6Q8NH81 332 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 HNRNPLLQ8WVV9 542 aaKnown RBP14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 LCN9Q8WX39 176 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MTBPQ96DY7 904 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 VPS11Q9H270 941 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 DLL3Q9NYJ7 618 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CIDEBQ9UHD4 219 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ACOT9Q9Y305 439 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PCDHGA1Q9Y5H4 931 aa14.09□□□□□ -0.15
TNFRSF1A-216ENST00000543995 A0A087X1B8 175 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 A0A096LPK6 155 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PABPN1LA6NDY0 278 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CDH16O75309 829 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PSIP1O75475 530 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 UBXN7O94888 489 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 TSPAN12O95859 305 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SYF2O95926 243 aaKnown RBP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 C2P06681 752 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 C8GP07360 202 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 SLC35E2BP0CK96 405 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CYP2A7P20853 494 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CCL7P80098 99 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 GPLD1P80108 840 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 E2F1Q01094 437 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 PUM1Q14671 1186 aaKnown RBP eCLIP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NR1D2Q14995 579 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 BEND6Q5SZJ8 279 aaPredicted RBP14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 NKAIN2Q5VXU1 208 aa14.08□□□□□ -0.16
TNFRSF1A-216ENST00000543995 CCDC91Q7Z6B0 441 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms