RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 ATL1Q8WXF7 558 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 GTF2H4Q92759 462 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 SH3GL1Q99961 368 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 CLSTN3Q9BQT9 956 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 TRPV5Q9NQA5 729 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 ABCC13Q9NSE7 274 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 PIM2Q9P1W9 311 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 GJB3O75712 270 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 HOXD8P13378 290 aaPredicted RBP12.31□□□□□ -0.44
SMCR5-201ENST00000543475 BMP1P13497 986 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 SLC2A4P14672 509 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 ALOX12P18054 663 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 CLK3P49761 638 aaKnown RBP12.31□□□□□ -0.44
SMCR5-201ENST00000543475 SCNN1GP51170 649 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 NRG1Q02297 640 aaPredicted RBP12.31□□□□□ -0.44
SMCR5-201ENST00000543475 KEAP1Q14145 624 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 PTGR1Q14914 329 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 SYT16Q17RD7 645 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 TYSND1Q2T9J0 566 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 DLK2Q6UY11 383 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 GPR149Q86SP6 731 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 GALNT13Q8IUC8 556 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 RAVER1Q8IY67 606 aaKnown RBP12.31□□□□□ -0.44
SMCR5-201ENST00000543475 PHACTR4Q8IZ21 702 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 KIAA1958Q8N8K9 716 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 ARRDC2Q8TBH0 407 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 PEX13Q92968 403 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 SEMA3CQ99985 751 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 PDGFDQ9GZP0 370 aaPredicted RBP12.31□□□□□ -0.44
SMCR5-201ENST00000543475 HSPE1-MOB4S4R3N1 261 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 UTRNP46939 3433 aa12.31□□□□□ -0.44
SMCR5-201ENST00000543475 A0A0G2JLL6 359 aaPredicted RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 PABPN1LA6NDY0 278 aaKnown RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 AIREO43918 545 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 RECQL5O94762 991 aaPredicted RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 PGLSO95336 258 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 MMP3P08254 477 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 DBTP11182 482 aaKnown RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 S100A5P33763 92 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 TGFBR2P37173 567 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 CLCNKBP51801 687 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 ARHGDIAP52565 204 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 HK3P52790 923 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 GTF2H3Q13889 308 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 GBX1Q14549 363 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 MSANTD2Q6P1R3 559 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 SHQ1Q6PI26 577 aaKnown RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 CCBE1Q6UXH8 406 aaPredicted RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 AHSA2Q719I0 299 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 PRRT2Q7Z6L0 340 aaPredicted RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 SLC22A15Q8IZD6 547 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 UMODL1-AS1Q8N2C9 162 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 OR52E4Q8NGH9 312 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 BRSK1Q8TDC3 778 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 NETO1Q8TDF5 533 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 PYCR2Q96C36 320 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 CDKN2AIPNLQ96HQ2 116 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 ITM2CQ9NQX7 267 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 RASSF1Q9NS23 344 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 VNN3Q9NY84 501 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 DOCK4Q8N1I0 1966 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 OR2A25A4D2G3 310 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 METTL15A6NJ78 407 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 MYO1GB0I1T2 1018 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 AREL1O15033 823 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 FGF1P05230 155 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 CNPP09543 421 aaKnown RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 MLLT6P55198 1093 aaPredicted RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 RPL38P63173 70 aaKnown RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 PTPRNQ16849 979 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 TPRG1LQ5T0D9 272 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 SLX4IPQ5VYV7 408 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 CPZQ66K79 652 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 ZDHHC21Q8IVQ6 265 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 BARD1Q99728 777 aaKnown RBP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 EMILIN2Q9BXX0 1053 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 ITPAQ9BY32 194 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 ELP3Q9H9T3 547 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 SLC25A37Q9NYZ2 338 aa12.3□□□□□ -0.44
SMCR5-201ENST00000543475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMCR5-201ENST00000543475 ARVCFO00192 962 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 NFKBIEO00221 500 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 HLA-DPA1P20036 260 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 PGFP49763 221 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 KRR1Q13601 381 aaKnown RBP12.29□□□□□ -0.44
SMCR5-201ENST00000543475 KIAA0040Q15053 153 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 PNCKQ6P2M8 343 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 USP43Q70EL4 1123 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 HEATR4Q86WZ0 1026 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 ELMOD1Q8N336 334 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 METTL4Q8N3J2 472 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 TTC29Q8NA56 475 aaPredicted RBP12.29□□□□□ -0.44
SMCR5-201ENST00000543475 SIDT2Q8NBJ9 832 aaKnown RBP12.29□□□□□ -0.44
SMCR5-201ENST00000543475 SLC38A4Q969I6 547 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 PYURFQ96I23 114 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 FNIP2Q9P278 1114 aa12.29□□□□□ -0.44
SMCR5-201ENST00000543475 TRMT6Q9UJA5 497 aaKnown RBP12.29□□□□□ -0.44
SMCR5-201ENST00000543475 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms