RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 IDUAP35475 653 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 HSPA7P48741 367 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 PIGFQ07326 219 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 ZNF846Q147U1 533 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 PTPRRQ15256 657 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CTF1Q16619 201 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 RFX4Q33E94 735 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 SPANXN4Q5MJ08 99 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 ATG9BQ674R7 924 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 FAM43BQ6ZT52 329 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CHST9Q7L1S5 443 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CHPFQ8IZ52 775 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 LIX1Q8N485 282 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 POP5Q969H6 163 aaKnown RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CCDC138Q96M89 665 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 NODALQ96S42 347 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 NEURL2Q9BR09 285 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CPPED1Q9BRF8 314 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 DGCR6LQ9BY27 220 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 KAT8Q9H7Z6 458 aaKnown RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 AKIP1Q9NQ31 210 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 SELENONQ9NZV5 590 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 IL17CQ9P0M4 197 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 WARS2Q9UGM6 360 aaKnown RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 TRPS1Q9UHF7 1281 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 FNDC3AQ9Y2H6 1198 aaKnown RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 PCDHGB1Q9Y5G3 927 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 DNAH12Q6ZR08 3092 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 TMEM221A6NGB7 291 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 GNGT2O14610 69 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 HS6ST1O60243 411 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CREG1O75629 220 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 GABARAPO95166 117 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 PGRP06401 933 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CDH3P22223 829 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 SLC11A2P49281 568 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 GZMMP51124 257 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 SGSHP51688 502 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 TRIM32Q13049 653 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 ACOX1Q15067 660 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 EGFLAMQ63HQ2 1017 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 NCEH1Q6PIU2 408 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 LINC00299Q6ZSB3 139 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 TRIM46Q7Z4K8 759 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 RNF168Q8IYW5 571 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 C2orf69Q8N8R5 385 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 DNAJB8Q8NHS0 232 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 ITPKCQ96DU7 683 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CCDC97Q96F63 343 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 SH3YL1Q96HL8 342 aaPredicted RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 CDK5RAP1Q96SZ6 601 aaKnown RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 TTLL2Q9BWV7 592 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 GABARAPL1Q9H0R8 117 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 ZMYM5Q9UJ78 669 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 TSR3Q9UJK0 312 aaKnown RBP12.67□□□□□ -0.38
PTCD2-212ENST00000543322 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
PTCD2-212ENST00000543322 A0A0U1RQS6 177 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 ZNF99A8MXY4 864 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 CLDN25C9JDP6 229 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 BCKDKO14874 412 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 AXIN1O15169 862 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 XYLBO75191 536 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 NDUFS2O75306 463 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 UGT2B11O75310 529 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 INMTO95050 263 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 ASGR1P07306 291 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 HOXB9P17482 250 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 ARPP19P56211 112 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 ARF5P84085 180 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 GPR17Q13304 367 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 GTDC1Q4AE62 458 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 LRIF1Q5T3J3 769 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 CACHD1Q5VU97 1274 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 FAM171A1Q5VUB5 890 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 DNAJC14Q6Y2X3 702 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 CERS6Q6ZMG9 384 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 DCP2Q8IU60 420 aaKnown RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 KRTCAP2Q8N6L1 136 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 PIK3C3Q8NEB9 887 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 LKAAEAR1Q8TD35 194 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 FAR1Q8WVX9 515 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 TBCDQ9BTW9 1192 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 FAM126AQ9BYI3 521 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 TRIT1Q9H3H1 467 aaKnown RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 INVSQ9Y283 1065 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 MAN2B2Q9Y2E5 1009 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 PKP3Q9Y446 797 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 DGKBQ9Y6T7 804 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 SLC38A8A6NNN8 435 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 M0QX08 132 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 CBX4O00257 560 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 MANBAO00462 879 aa12.66□□□□□ -0.38
PTCD2-212ENST00000543322 KPNA4O00629 521 aaPredicted RBP12.66□□□□□ -0.38
PTCD2-212ENST00000543322 FFAR3O14843 346 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms