RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZDHHC11BP0C7U3 371 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PLA2G4BP0C869 781 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TRIM49P0CI25 452 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TRIM49CP0CI26 452 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DUX4L2P0CJ85 424 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DUX4L3P0CJ86 424 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DUX4L4P0CJ87 422 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DUX4L5P0CJ88 424 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DUX4L6P0CJ89 424 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DUX4L7P0CJ90 424 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 APEHP13798 732 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 IFNGR1P15260 489 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DPEP1P16444 411 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 CPEP16870 476 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TNNI1P19237 187 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TNNI3P19429 210 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 POU3F2P20265 443 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TNFAIP3P21580 790 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MATN1P21941 496 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TGM2P21980 687 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 CA4P22748 312 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PTBP1P26599 531 aaKnown RBP eCLIP4.27□□□□□ -1.733e-55■■□□□ 13.5
SNHG1-219ENST00000542112 CDC25AP30304 524 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 HOXC8P31273 242 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 HOXC9P31274 260 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ADRA1BP35368 520 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 IGFALSP35858 605 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 LTBRP36941 435 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 CAPGP40121 348 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 KCNC1P48547 511 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GSK3AP49840 483 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 LIG4P49917 911 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ALDH3A2P51648 485 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PLK1P53350 603 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 RAD23AP54725 363 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SNAP25P60880 206 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SKP1P63208 163 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MPP1Q00013 466 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 BEX3Q00994 111 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DEFA6Q01524 100 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GCNT1Q02742 428 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GRM1Q13255 1194 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DYRK1AQ13627 763 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 FGL2Q14314 439 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MAN2A1Q16706 1144 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PTPN21Q16825 1174 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 HADHQ16836 314 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 BMT2Q1RMZ1 405 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MICAQ29983 383 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 KIZQ2M2Z5 673 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PARP15Q460N3 678 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TRIM60Q495X7 471 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GPR33Q49SQ1 333 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MINDY4Q4G0A6 757 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 FAM98BQ52LJ0 330 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GPAT3Q53EU6 434 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 C2CD6Q53TS8 623 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PRR16Q569H4 304 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 NHSL2Q5HYW2 709 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TMEM31Q5JXX7 168 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 RBM48Q5RL73 367 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 KRT39Q6A163 491 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 C11orf63Q6NUN7 778 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 EFCAB12Q6NXP0 572 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SLC27A4Q6P1M0 643 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 XRRA1Q6P2D8 792 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 CASC4Q6P4E1 433 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 RHBDF2Q6PJF5 856 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 FAM111BQ6SJ93 734 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 KIAA1324Q6UXG2 1013 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 CYP2R1Q6VVX0 501 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 RTL4Q6ZR62 310 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 FRMD7Q6ZUT3 714 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 FAM122BQ7Z309 247 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 C16orf62Q7Z3J2 963 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GALNT10Q86SR1 603 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 USP37Q86T82 979 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 IRF2BP1Q8IU81 584 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ZC3H7AQ8IWR0 971 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SLC35F3Q8IY50 421 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ADGRG2Q8IZP9 1017 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MPP5Q8N3R9 675 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 OXR1Q8N573 874 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 Q8N9G6 341 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PLBD2Q8NHP8 589 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 FAM216AQ8WUB2 273 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 DEDD2Q8WXF8 326 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ASB11Q8WXH4 323 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 ZHX1-C8orf76Q96EF9 292 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MRPL48Q96GC5 212 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 HSFY1Q96LI6 401 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 RILPQ96NA2 401 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 AGAP2Q99490 1192 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 EYA3Q99504 573 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MMP19Q99542 508 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 RTKNQ9BST9 563 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MED18Q9BUE0 208 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms