RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-206	ENST00000541836	FAM209A	Q5JX71	171 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MARC1	Q5VT66	337 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	LETMD1	Q6P1Q0	360 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TUBA1A	Q71U36	451 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TTC16	Q8NEE8	873 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TXNRD2	Q9NNW7	524 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DCAF13	Q9NV06	445 aa	Known RBP	13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TAS2R13	Q9NYV9	303 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SPO11	Q9Y5K1	396 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	LCHN	A4D1U4	455 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CENPBD1	B2RD01	187 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	AREL1	O15033	823 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CREG1	O75629	220 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SCEL	O95171	688 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	PEX11B	O96011	259 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CAPN1	P07384	714 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	EPHA2	P29317	976 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	KRT20	P35900	424 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	GGT5	P36269	586 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	RACK1	P63244	317 aa	Known RBP	13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MAPKAPK3	Q16644	382 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	AP5B1	Q2VPB7	878 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	FAM174B	Q3ZCQ3	159 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ATAD3C	Q5T2N8	411 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CPZ	Q66K79	652 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	PNCK	Q6P2M8	343 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	C14orf80	Q86SX3	495 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	NLGN4X	Q8N0W4	816 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	RTL3	Q8N8U3	475 aa	Known RBP	13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ASCC1	Q8N9N2	400 aa	Known RBP	13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ARRDC4	Q8NCT1	418 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	IL17RD	Q8NFM7	739 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SENP8	Q96LD8	212 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	APOL4	Q9BPW4	351 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ARPC5L	Q9BPX5	153 aa		13.43	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MYO1G	B0I1T2	1018 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	STX16	O14662	325 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	HAT1	O14929	419 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ANKRD28	O15084	1053 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	IRAK2	O43187	625 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	GJB3	O75712	270 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DDN	O94850	711 aa	Predicted RBP	13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	APOA1	P02647	267 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CHRNB1	P11230	501 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	STC1	P52823	247 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CXCR4	P61073	352 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	E2F2	Q14209	437 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	GTDC1	Q4AE62	458 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SETMAR	Q53H47	684 aa	Predicted RBP	13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MANEAL	Q5VSG8	457 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CHPF	Q8IZ52	775 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	AMER2	Q8N7J2	671 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	OR6F1	Q8NGZ6	308 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	OR4L1	Q8NH43	312 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	NETO1	Q8TDF5	533 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	GTF2H4	Q92759	462 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SLC38A4	Q969I6	547 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ZFP42	Q96MM3	310 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	GPR21	Q99679	349 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ITPA	Q9BY32	194 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CCNB1IP1	Q9NPC3	277 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	WDR70	Q9NW82	654 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	QPCTL	Q9NXS2	382 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SLC25A37	Q9NYZ2	338 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CD274	Q9NZQ7	290 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DNAJC25-GNG10	A0A024R161	153 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ATXN1L	P0C7T5	689 aa	Known RBP	13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	GADD45A	P24522	165 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	HOXC13	P31276	330 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	AKT1	P31749	480 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	VGLL4	Q14135	290 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CEP68	Q76N32	757 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SMARCD1	Q96GM5	515 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TMEM45A	Q9NWC5	275 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	OSER1	Q9NX31	292 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DKK3	Q9UBP4	350 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MED16	Q9Y2X0	877 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	BOLA1	Q9Y3E2	137 aa		13.42	□□□□□ -0.26
NPIPA1-206	ENST00000541836	LOC100506127	A0A0U1RQW1	187 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836		E9PAM4	449 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	E2F3	O00716	465 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SCO2	O43819	266 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CNMD	O75829	334 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	HAPLN1	P10915	354 aa	Predicted RBP	13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DAP	P51397	102 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	OR2B6	P58173	313 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DEFA1	P59665	94 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	DEFA3	P59666	94 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	ZNF45	Q02386	682 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	KEAP1	Q14145	624 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	CARD16	Q5EG05	197 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	PRSS36	Q5K4E3	855 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SHQ1	Q6PI26	577 aa	Known RBP	13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	MSRB3	Q8IXL7	192 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TTC29	Q8NA56	475 aa	Predicted RBP	13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	SCAMP5	Q8TAC9	235 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	HMCES	Q96FZ2	354 aa		13.41	□□□□□ -0.26
NPIPA1-206	ENST00000541836	TRMT13	Q9NUP7	481 aa	Known RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms