RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SIX3O95343 332 aaPredicted RBP27.17■■□□□ 1.94
CCM2-218ENST00000541586 IFT88Q13099 833 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 KIF19Q2TAC6 998 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 UNC50Q53HI1 259 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 FRMD7Q6ZUT3 714 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 SPATS2Q86XZ4 545 aaKnown RBP27.17■■□□□ 1.94
CCM2-218ENST00000541586 WDR75Q8IWA0 830 aaKnown RBP27.17■■□□□ 1.94
CCM2-218ENST00000541586 TMEM120AQ9BXJ8 343 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 GSTO2Q9H4Y5 243 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 NUDT4Q9NZJ9 180 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 CD274Q9NZQ7 290 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 SLC6A14Q9UN76 642 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 SNX11Q9Y5W9 270 aa27.17■■□□□ 1.94
CCM2-218ENST00000541586 SPTY2D1-AS1A0A0U1RR47 76 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 ZNF8P17098 575 aaPredicted RBP27.16■■□□□ 1.94
CCM2-218ENST00000541586 MPSTP25325 297 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 ARFIP2P53365 341 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 NHLH1Q02575 133 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 GTF2H3Q13889 308 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 TCEAL6Q6IPX3 200 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 DCP2Q8IU60 420 aaKnown RBP27.16■■□□□ 1.94
CCM2-218ENST00000541586 TRAPPC5Q8IUR0 188 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 DLG3Q92796 817 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 TCEAL3Q969E4 200 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 TSACCQ96A04 125 aaPredicted RBP27.16■■□□□ 1.94
CCM2-218ENST00000541586 WDR92Q96MX6 357 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 NUSAP1Q9BXS6 441 aaKnown RBP27.16■■□□□ 1.94
CCM2-218ENST00000541586 SHCBP1LQ9BZQ2 653 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 FAM8A1Q9UBU6 413 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 HAO1Q9UJM8 370 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 TMCO1Q9UM00 188 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 OARD1Q9Y530 152 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 LRRC14BA6NHZ5 514 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 SCAMP1O15126 338 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 SNX2O60749 519 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 SUPT7LO94864 414 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 HOXC4P09017 264 aaPredicted RBP27.16■■□□□ 1.94
CCM2-218ENST00000541586 AQP5P55064 265 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 NXPH1P58417 271 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 KIAA1024LP59773 190 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 SPEM2Q0P670 501 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 PRKAA1Q13131 559 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 SLC23A3Q6PIS1 610 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 OR56A4Q8NGH8 313 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 AGR3Q8TD06 166 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 ZNF514Q96K75 400 aaPredicted RBP27.16■■□□□ 1.94
CCM2-218ENST00000541586 KCNK4Q9NYG8 393 aa27.16■■□□□ 1.94
CCM2-218ENST00000541586 STX16-NPEPL1H3BU86 382 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 STX16O14662 325 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 KHNYNO15037 678 aaKnown RBP27.15■■□□□ 1.94
CCM2-218ENST00000541586 SLCO2B1O94956 709 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 SNUPNO95149 360 aaKnown RBP27.15■■□□□ 1.94
CCM2-218ENST00000541586 MPC1LP0DKB6 136 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 KELP23276 732 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 ALDH18A1P54886 795 aaKnown RBP27.15■■□□□ 1.94
CCM2-218ENST00000541586 FZD2Q14332 565 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 SYTL3Q4VX76 610 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 ZNF547Q8IVP9 402 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 CAAP1Q9H8G2 361 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 KLQ9UEF7 1012 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 ZDHHC2Q9UIJ5 367 aa27.15■■□□□ 1.94
CCM2-218ENST00000541586 FFAR2O15552 330 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 EEF1DP29692 281 aaKnown RBP27.14■■□□□ 1.94
CCM2-218ENST00000541586 PBLDP30039 288 aaPredicted RBP27.14■■□□□ 1.94
CCM2-218ENST00000541586 BNC1Q01954 994 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 GRIK2Q13002 908 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 PHKG1Q16816 387 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 ZNF658BQ4V348 819 aaPredicted RBP27.14■■□□□ 1.94
CCM2-218ENST00000541586 FBXO48Q5FWF7 155 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 PLA2G2CQ5R387 149 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 SKA2Q8WVK7 121 aaPredicted RBP27.14■■□□□ 1.94
CCM2-218ENST00000541586 SIKE1Q9BRV8 207 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 TRMOQ9BU70 441 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 CAPN10Q9HC96 672 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 GPR27Q9NS67 375 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 DNAJC28Q9NX36 388 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 GPR34Q9UPC5 381 aa27.14■■□□□ 1.94
CCM2-218ENST00000541586 WDR87Q6ZQQ6 2873 aa27.14■■□□□ 1.93
CCM2-218ENST00000541586 CEACAM5P06731 702 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 AGTR2P50052 363 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 RPL14P50914 215 aaKnown RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 SETDB1Q15047 1291 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 NEK10Q6ZWH5 1172 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 HID1Q8IV36 788 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 LILRA3Q8N6C8 439 aaPredicted RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 FGF22Q9HCT0 170 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 GULP1Q9UBP9 304 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 PNMA8BQ9ULN7 279 aaPredicted RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 PRKAB1Q9Y478 270 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 SLC5A10A0PJK1 596 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 SRP54P61011 504 aaKnown RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 GALNT1Q10472 559 aaPredicted RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 TCEA2Q15560 299 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 MAVSQ7Z434 540 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 PARGQ86W56 976 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 ASB11Q8WXH4 323 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 TMEM159Q96B96 161 aa27.13■■□□□ 1.93
CCM2-218ENST00000541586 LINC00615Q96LM1 132 aaPredicted RBP27.13■■□□□ 1.93
CCM2-218ENST00000541586 GTPBP2Q9BX10 602 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms