RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 RAD51AP1Q96B01 352 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 CD180Q99467 661 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 RBBP8Q99708 897 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 ZMYND15Q9H091 742 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 SRMSQ9H3Y6 488 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 OR6C2Q9NZP2 312 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 PDP2Q9P2J9 529 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 MED16Q9Y2X0 877 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 ENTPD2Q9Y5L3 495 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 PSAT1Q9Y617 370 aa18.28■□□□□ 0.52
VPS33A-205ENST00000541169 CFAP20Q9Y6A4 193 aaKnown RBP18.28■□□□□ 0.52
VPS33A-205ENST00000541169 HGSO14964 777 aaPredicted RBP18.27■□□□□ 0.52
VPS33A-205ENST00000541169 CATP04040 527 aaKnown RBP18.27■□□□□ 0.52
VPS33A-205ENST00000541169 HSD17B2P37059 387 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 LIMK2P53671 638 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 PRKAA1Q13131 559 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 ISXQ2M1V0 245 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 AMZ1Q400G9 498 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 CCNI2Q6ZMN8 369 aaPredicted RBP18.27■□□□□ 0.52
VPS33A-205ENST00000541169 PPM1NQ8N819 430 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 SIDT2Q8NBJ9 832 aaKnown RBP18.27■□□□□ 0.52
VPS33A-205ENST00000541169 FBXO15Q8NCQ5 510 aaPredicted RBP18.27■□□□□ 0.52
VPS33A-205ENST00000541169 PDLIM5Q96HC4 596 aaKnown RBP18.27■□□□□ 0.52
VPS33A-205ENST00000541169 ELMO2Q96JJ3 720 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 NDNQ99608 321 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 GPR22Q99680 433 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 CCDC77Q9BR77 488 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 ANKZF1Q9H8Y5 726 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 ANGPTL2Q9UKU9 493 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 WASF3Q9UPY6 502 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 MSRB2Q9Y3D2 182 aa18.27■□□□□ 0.52
VPS33A-205ENST00000541169 CACNA1AO00555 2505 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 FAM95CA0A1B0GW59 222 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 CSO75390 466 aaKnown RBP18.26■□□□□ 0.51
VPS33A-205ENST00000541169 ACSL3O95573 720 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 C1QAP02745 245 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 C8GP07360 202 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 CNTFP26441 200 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 INHBCP55103 352 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 ZFP36L1Q07352 338 aaKnown RBP18.26■□□□□ 0.51
VPS33A-205ENST00000541169 ABRQ12979 859 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 SP140Q13342 867 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 ACSBG2Q5FVE4 666 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 NAPRTQ6XQN6 538 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 AMIGO1Q86WK6 493 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 VRK3Q8IV63 474 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 MYO1HQ8N1T3 1032 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 NKAPQ8N5F7 415 aaKnown RBP18.26■□□□□ 0.51
VPS33A-205ENST00000541169 NCSTNQ92542 709 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 LIN37Q96GY3 246 aaPredicted RBP18.26■□□□□ 0.51
VPS33A-205ENST00000541169 TBC1D10AQ9BXI6 508 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 NRSN2Q9GZP1 204 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 PPCSQ9HAB8 311 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 SMYD2Q9NRG4 433 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 FETUBQ9UGM5 382 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 PTPRBP23467 1997 aa18.26■□□□□ 0.51
VPS33A-205ENST00000541169 MN1Q10571 1320 aaPredicted RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 DCHS1Q96JQ0 3298 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 OR5K3A6NET4 321 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 ZNF839A8K0R7 811 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 CXorf49A8MYA2 514 aaPredicted RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 SLC16A5O15375 505 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 HYAL3O43820 417 aaPredicted RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 ZBTB14O43829 449 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 PSIP1O75475 530 aaKnown RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 C9P02748 559 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 MAP4P27816 1152 aaKnown RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 MLLT3P42568 568 aaPredicted RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 SERPINB9P50453 376 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 CDKN2DP55273 166 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 RBM20Q5T481 1227 aaKnown RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 LGSNQ5TDP6 509 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 CYB5D1Q6P9G0 228 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 USP53Q70EK8 1073 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 ZNF761Q86XN6 746 aaPredicted RBP18.25■□□□□ 0.51
VPS33A-205ENST00000541169 OR52E1Q8NGJ3 308 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 OR5AR1Q8NGP9 310 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 ASB11Q8WXH4 323 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 SLC22A18Q96BI1 424 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 FAM136AQ96C01 138 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 CMKLR1Q99788 373 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 SCNM1Q9BWG6 230 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 TXLNGYQ9BZA5 131 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 LNPEPQ9UIQ6 1025 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 ZNF180Q9UJW8 692 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 UNC13CQ8NB66 2214 aa18.25■□□□□ 0.51
VPS33A-205ENST00000541169 PABPN1LA6NDY0 278 aaKnown RBP18.24■□□□□ 0.51
VPS33A-205ENST00000541169 GFYI3L273 518 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 FKBP9O95302 570 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 C1orf105O95561 183 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 INHBAP08476 426 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 ANKRD34CP0C6C1 535 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 STMN1P16949 149 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 SLC26A3P40879 764 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 RAB28P51157 221 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 TARDBPQ13148 414 aaKnown RBP eCLIP18.24■□□□□ 0.51
VPS33A-205ENST00000541169 ARHGAP19Q14CB8 494 aa18.24■□□□□ 0.51
VPS33A-205ENST00000541169 DUS1LQ6P1R4 473 aaKnown RBP18.24■□□□□ 0.51
VPS33A-205ENST00000541169 EMBQ6PCB8 327 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms