RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 C6orf183Q5T699 404 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 VTCN1Q7Z7D3 282 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 B3GNT8Q7Z7M8 397 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC22A16Q86VW1 577 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 THEM5Q8N1Q8 247 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR7A2PQ8NGA2 310 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 FBXO32Q969P5 355 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 EID2BQ96D98 161 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 EGLN2Q96KS0 407 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 MARCH7Q9H992 704 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZIM2Q9NZV7 527 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 CAB39Q9Y376 341 aaPredicted RBP10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 PCDHB14Q9Y5E9 798 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 GBF1Q92538 1859 aa10.17□□□□□ -0.78
CDC42SE1-207ENST00000540998 HTR3EA5X5Y0 456 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 M0R129 80 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 BCKDKO14874 412 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 PRAMEF11O60813 436 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 NDST3O95803 873 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ANGPTL1O95841 491 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 MT-ND2P03891 347 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ALDH2P05091 517 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 HLA-DPA1P20036 260 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TACR1P25103 407 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR1G1P47890 313 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 KCNC4Q03721 635 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 IL10RBQ08334 325 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 CDK5R2Q13319 367 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 PWP1Q13610 501 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GTF2H2Q13888 395 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 PCBP1Q15365 356 aaKnown RBP eCLIP10.16□□□□□ -0.784e-8■■■□□ 14.6
CDC42SE1-207ENST00000540998 MAPKAPK3Q16644 382 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 COQ5Q5HYK3 327 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GTF2H2CQ6P1K8 395 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF467Q7Z7K2 595 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 RASAL3Q86YV0 1011 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 HDAC2Q92769 488 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TSSK3Q96PN8 268 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF347Q96SE7 839 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TUBA1CQ9BQE3 449 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 AKIP1Q9NQ31 210 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ABCB10Q9NRK6 738 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 WDR70Q9NW82 654 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GIN1Q9NXP7 522 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 AFF4Q9UHB7 1163 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TSC22D4Q9Y3Q8 395 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRPV2Q9Y5S1 764 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 M0R3G1 203 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 VPS26AO75436 327 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GMNNO75496 209 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 C7P10643 843 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TPTEP56180 551 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 KIAA0040Q15053 153 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ARMC12Q5T9G4 340 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 RGMBQ6NW40 437 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAM151BQ6UXP7 276 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 MON1AQ86VX9 555 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 DCP2Q8IU60 420 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 COLGALT2Q8IYK4 626 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 SCML4Q8N228 414 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GPR150Q8NGU9 434 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 EGFL8Q99944 293 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 DPH2Q9BQC3 489 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 NLE1Q9NVX2 485 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 DLGAP4Q9Y2H0 992 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZFP37Q9Y6Q3 630 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ELOVL7A1L3X0 281 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF99A8MXY4 864 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 H0Y626 953 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 UGT2B11O75310 529 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 SEC22BO75396 215 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRIM16O95361 564 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 OXSR1O95747 527 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 IRF1P10914 325 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 OGNP20774 298 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TWF1Q12792 350 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRAF3Q13114 568 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GBX1Q14549 363 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 CBX2Q14781 532 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 NPTX1Q15818 432 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 CPSF6Q16630 551 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 ATXN7L2Q5T6C5 722 aaPredicted RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 PAGE2Q7Z2X7 111 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GALNT7Q86SF2 657 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 MFSD4AQ8N468 514 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 GOLM1Q8NBJ4 401 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 HACD3Q9P035 362 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 DNAJB9Q9UBS3 223 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 AGO1Q9UL18 857 aaKnown RBP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 PCDHGA10Q9Y5H3 936 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 PRSS21Q9Y6M0 314 aa10.16□□□□□ -0.78
CDC42SE1-207ENST00000540998 WASH4PA8MWX3 477 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 NT5C1B-RDH14C9J2C7 533 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 M0QZQ0 153 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 TAPBPO15533 448 aa10.15□□□□□ -0.78
CDC42SE1-207ENST00000540998 VPS4BO75351 444 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms