RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CHRNA10Q9GZZ6 450 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 ETNK1Q9HBU6 452 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 APMAPQ9HDC9 416 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 LZTFL1Q9NQ48 299 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 CASS4Q9NQ75 786 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 CROTQ9UKG9 612 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 SRPK3Q9UPE1 567 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 R3HDM2Q9Y2K5 976 aaKnown RBP10.1□□□□□ -0.79
CDCA3-208ENST00000540683 TCAF1Q9Y4C2 921 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 CFAP20Q9Y6A4 193 aaKnown RBP10.1□□□□□ -0.79
CDCA3-208ENST00000540683 AP1M2Q9Y6Q5 423 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 ZNF462Q96JM2 2506 aa10.1□□□□□ -0.79
CDCA3-208ENST00000540683 GOLGA6L10A0A0M3HER8 536 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 LOC101059948A0A1B0GTJ6 334 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 PIPSLA2A3N6 862 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 C9J4A7 227 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 KIF1CO43896 1103 aaKnown RBP10.09□□□□□ -0.79
CDCA3-208ENST00000540683 KATNA1O75449 491 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 CREG1O75629 220 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 FGGP02679 453 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 FAM87AP0C7U9 286 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 POLR2CP19387 275 aaPredicted RBP10.09□□□□□ -0.79
CDCA3-208ENST00000540683 PRDX3P30048 256 aaKnown RBP10.09□□□□□ -0.79
CDCA3-208ENST00000540683 CCNFP41002 786 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 GDF10P55107 478 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 SH3BP2P78314 561 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
CDCA3-208ENST00000540683 KCNC4Q03721 635 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 ACVR1Q04771 509 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 DNASE1L3Q13609 305 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 KIR2DS3Q14952 304 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 UNC5DQ6UXZ4 953 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 HPS6Q86YV9 775 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 LRRC8AQ8IWT6 810 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 OR5K2Q8NHB8 316 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 GRK7Q8WTQ7 553 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 C1orf54Q8WWF1 131 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 ATG4AQ8WYN0 398 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 HDAC10Q969S8 669 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 PMEPA1Q969W9 287 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 VPS50Q96JG6 964 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 PBKQ96KB5 322 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 TCF12Q99081 682 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 DHRS4Q9BTZ2 278 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 CARD6Q9BX69 1037 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 PITPNM3Q9BZ71 974 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 TWSG1Q9GZX9 223 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 FAM96AQ9H5X1 160 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 MRM3Q9HC36 420 aaKnown RBP10.09□□□□□ -0.79
CDCA3-208ENST00000540683 CATSPERZQ9NTU4 200 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 SAMD15Q9P1V8 674 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 GNPTGQ9UJJ9 305 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 JRKLQ9Y4A0 524 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 PIKFYVEQ9Y2I7 2098 aa10.09□□□□□ -0.79
CDCA3-208ENST00000540683 CCDC162PA2VCL2 907 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 E7EQ34 232 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PRMT5O14744 637 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 ZSCAN12O43309 604 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 SGTAO43765 313 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 CEP104O60308 925 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 NDUFS3O75489 264 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 RFPL1O75677 317 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 GOT2P00505 430 aaKnown RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 EBLN1P0CF75 366 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PRKAR1AP10644 381 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PIM1P11309 404 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 FOLR1P15328 257 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 TPSB2P20231 275 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PTPN4P29074 926 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 FOXN2P32314 431 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 KPNA2P52292 529 aaKnown RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 RRADP55042 308 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 ITGA1P56199 1179 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 OLIG2Q13516 323 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 SNX1Q13596 522 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 TPSAB1Q15661 275 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 LACTB2Q53H82 288 aaPredicted RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 IZUMO3Q5VZ72 239 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PTRHD1Q6GMV3 140 aaKnown RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PWWP2BQ6NUJ5 590 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 C16orf46Q6P387 395 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 TLDC1Q6P9B6 456 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 SPESP1Q6UW49 350 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 TIPARPQ7Z3E1 657 aaKnown RBP10.08□□□□□ -0.8
CDCA3-208ENST00000540683 CLDN19Q8N6F1 224 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 EXD3Q8N9H8 876 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 OR52E1Q8NGJ3 308 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 PROKR1Q8TCW9 393 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 DLG3Q92796 817 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 CLIP3Q96DZ5 547 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 POM121Q96HA1 1249 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 ELMO2Q96JJ3 720 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 HGH1Q9BTY7 390 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 MAN2B2Q9Y2E5 1009 aa10.08□□□□□ -0.8
CDCA3-208ENST00000540683 TCRBV7S2A1N4TA0A589 114 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 ZNF839A8K0R7 811 aa10.07□□□□□ -0.8
CDCA3-208ENST00000540683 CD3EAPO15446 510 aaKnown RBP10.07□□□□□ -0.8
CDCA3-208ENST00000540683 NKX2-8O15522 239 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms