RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CD200R1Q8TD46 325 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 RDH12Q96NR8 316 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 DSN1Q9H410 356 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 TMEM248Q9NWD8 314 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 LAMA3Q16787 3333 aa13.67□□□□□ -0.22
SCNN1A-215ENST00000540037 WASH4PA8MWX3 477 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 RAMP2O60895 175 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 CREG1O75629 220 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 KCNK2O95069 426 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ALOX5P09917 674 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 OR1E1P30953 314 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ALDH7A1P49419 539 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 TBX4P57082 545 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SLC35A2P78381 396 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ZNF235Q14590 738 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 MAPKAPK3Q16644 382 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 COLEC12Q5KU26 742 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 OVOS1Q6IE37 1185 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ZNF540Q8NDQ6 660 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 OR8J3Q8NGG0 315 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 LGALS12Q96DT0 336 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 DACH2Q96NX9 599 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 RPRD1AQ96P16 312 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ZNF382Q96SR6 550 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 C1QTNF3Q9BXJ4 246 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 TRIT1Q9H3H1 467 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 AREL1O15033 823 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 FGF1P05230 155 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 IGFBP5P24593 272 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 GRK4P32298 578 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 PSEN2P49810 448 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ZNF140P52738 457 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ILF2Q12905 390 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 GTF2H3Q13889 308 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 CES5AQ6NT32 575 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SPATA2LQ8IUW3 424 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 OR5K1Q8NHB7 308 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 MTFMTQ96DP5 389 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SERPINB11Q96P15 392 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ASPSCR1Q9BZE9 553 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 FKBPLQ9UIM3 349 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ATP11BQ9Y2G3 1177 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 CAB39Q9Y376 341 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 GBF1Q92538 1859 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ANKRD36A6QL64 1941 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 MYO1GB0I1T2 1018 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 CCDC159P0C7I6 412 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 HLA-DPA1P20036 260 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 HTR7P34969 479 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 DAPP51397 102 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 NEK2P51955 445 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 IFITM2Q01629 132 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SERINC3Q13530 473 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 GLT6D1Q7Z4J2 308 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 CAPSLQ8WWF8 208 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ELMO1Q92556 727 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 TSPAN18Q96SJ8 248 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ABCG8Q9H221 673 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 MARCH7Q9H992 704 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 NECTIN3Q9NQS3 549 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 DCAF13Q9NV06 445 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 TRMT6Q9UJA5 497 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 ERVK-11Q9UQG0 969 aa13.66□□□□□ -0.22
SCNN1A-215ENST00000540037 SLC16A6O15403 523 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 NDST3O95803 873 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 RYKP34925 604 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 HSPA7P48741 367 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 IL2P60568 153 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 PHC1P78364 1004 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 TOP3AQ13472 1001 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 SOWAHCQ53LP3 525 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 PRSS36Q5K4E3 855 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 TLK2Q86UE8 772 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 ARMC8Q8IUR7 673 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 LYSMD2Q8IV50 215 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 GPC2Q8N158 579 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 LIX1Q8N485 282 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 C1orf74Q96LT6 269 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 TPK1Q9H3S4 243 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 NSUN3Q9H649 340 aaKnown RBP13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 RNF167Q9H6Y7 350 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 NLE1Q9NVX2 485 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 VPS4AQ9UN37 437 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 TLR6Q9Y2C9 796 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 COMMD10Q9Y6G5 202 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 PATJQ8NI35 1801 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 TLR5O60602 858 aa13.65□□□□□ -0.22
SCNN1A-215ENST00000540037 PKMP14618 531 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms