RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CDK16Q00536 496 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 MSLNQ13421 630 aaPredicted RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 ATP13A5Q4VNC0 1218 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 LDLRAP1Q5SW96 308 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 SLC6A19Q695T7 634 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 ABRAXAS1Q6UWZ7 409 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 FAM151BQ6UXP7 276 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 RBM12BQ8IXT5 1001 aaKnown RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 SRRM1Q8IYB3 904 aaKnown RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 BEND7Q8N7W2 519 aaPredicted RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 ENDOVQ8N8Q3 282 aaKnown RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 OR4K2Q8NGD2 314 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 OR52K1Q8NGK4 314 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 TRIM44Q96DX7 344 aaPredicted RBP14.54□□□□□ -0.08
USB1-203ENST00000539737 SLC41A2Q96JW4 573 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 RUNDC3BQ96NL0 473 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 MLXIPLQ9NP71 852 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 IL26Q9NPH9 171 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 FGF21Q9NSA1 209 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 POT1Q9NUX5 634 aa14.54□□□□□ -0.08
USB1-203ENST00000539737 PIKFYVEQ9Y2I7 2098 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 CCDC88CQ9P219 2028 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 C21orf140B9A014 251 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A9O60656 530 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 SCRG1O75711 98 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 PRAMEF1O95521 474 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A6P19224 532 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 TPSB2P20231 275 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A1P22309 533 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A4P22310 534 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 CASQ1P31415 396 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 TMEM115Q12893 351 aaPredicted RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 ABRQ12979 859 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 NFE2L1Q14494 772 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 PTPRCAPQ14761 206 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 POU6F1Q14863 301 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 PLCL1Q15111 1095 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 TRIP13Q15645 432 aaPredicted RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 TPSAB1Q15661 275 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 RPE65Q16518 533 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 PTCHD3Q3KNS1 767 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 DNTTIP2Q5QJE6 756 aaKnown RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 CREG2Q8IUH2 290 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 TMEM126BQ8IUX1 230 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 RASGEF1AQ8N9B8 481 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 ADAMTS17Q8TE56 1095 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 ZDHHC12Q96GR4 267 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 ZNF514Q96K75 400 aaPredicted RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 RANBP9Q96S59 729 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 KLHL25Q9H0H3 589 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A7Q9HAW7 530 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A10Q9HAW8 530 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 UGT1A8Q9HAW9 530 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 PDE7BQ9NP56 450 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 IMP3Q9NV31 184 aaKnown RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 SMOXQ9NWM0 555 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 FARSAQ9Y285 508 aaKnown RBP14.53□□□□□ -0.08
USB1-203ENST00000539737 FER1L5A0AVI2 2057 aa14.53□□□□□ -0.08
USB1-203ENST00000539737 HEATR9A2RTY3 570 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 OR2AG2A6NM03 316 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 FANCGO15287 622 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 TOX3O15405 576 aaPredicted RBP14.52□□□□□ -0.09
USB1-203ENST00000539737 LDB2O43679 373 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 TPH1P17752 444 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 ITGALP20701 1170 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 AKT1P31749 480 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 VPS41P49754 854 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 SARNPP82979 210 aaKnown RBP14.52□□□□□ -0.09
USB1-203ENST00000539737 GPS1Q13098 491 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 ATP1A4Q13733 1029 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 PPP1R7Q15435 360 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 CHRNA6Q15825 494 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 CYB5D1Q6P9G0 228 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 DET1Q7L5Y6 550 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 MAMDC2Q7Z304 686 aaPredicted RBP14.52□□□□□ -0.09
USB1-203ENST00000539737 CISD2Q8N5K1 135 aaKnown RBP14.52□□□□□ -0.09
USB1-203ENST00000539737 LILRA3Q8N6C8 439 aaPredicted RBP14.52□□□□□ -0.09
USB1-203ENST00000539737 STYXQ8WUJ0 223 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 SLCO2A1Q92959 643 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 SLAMF7Q9NQ25 335 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 ASF1BQ9NVP2 202 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 PIH1D1Q9NWS0 290 aaKnown RBP14.52□□□□□ -0.09
USB1-203ENST00000539737 FKBPLQ9UIM3 349 aa14.52□□□□□ -0.09
USB1-203ENST00000539737 DIDO1Q9BTC0 2240 aaKnown RBP14.51□□□□□ -0.09
USB1-203ENST00000539737 H7C0S8 307 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 CCDC188H7C350 402 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 GAPDHSO14556 408 aaPredicted RBP14.51□□□□□ -0.09
USB1-203ENST00000539737 SRP72O76094 671 aaKnown RBP14.51□□□□□ -0.09
USB1-203ENST00000539737 TMEM63AO94886 807 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 LDLRP01130 860 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 MT-ND3P03897 115 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 RALBP11234 206 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 MSH3P20585 1137 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 MAGEA6P43360 314 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 ARL4DP49703 201 aa14.51□□□□□ -0.09
USB1-203ENST00000539737 KPNA2P52292 529 aaKnown RBP14.51□□□□□ -0.09
USB1-203ENST00000539737 RPS15P62841 145 aaKnown RBP14.51□□□□□ -0.09
USB1-203ENST00000539737 PLEKHN1Q494U1 663 aaPredicted RBP14.51□□□□□ -0.09
USB1-203ENST00000539737 PLEKHS1Q5SXH7 462 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms