RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PDZD8Q8NEN9 1154 aa13.78□□□□□ -0.2
UBE3B-210ENST00000539599 RNF217Q8TC41 542 aa13.78□□□□□ -0.2
UBE3B-210ENST00000539599 ALG14Q96F25 216 aa13.78□□□□□ -0.2
UBE3B-210ENST00000539599 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
UBE3B-210ENST00000539599 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
UBE3B-210ENST00000539599 PRRG1O14668 218 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 GLUD1P00367 558 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 ANXA6P08133 673 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 CDH1P12830 882 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 ZNF182P17025 639 aaPredicted RBP13.77□□□□□ -0.2
UBE3B-210ENST00000539599 FSHRP23945 695 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 ADARP55265 1226 aaKnown RBP13.77□□□□□ -0.2
UBE3B-210ENST00000539599 ESRRGP62508 458 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 PWP1Q13610 501 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 LDLRAP1Q5SW96 308 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 ZNF648Q5T619 568 aaPredicted RBP13.77□□□□□ -0.2
UBE3B-210ENST00000539599 DUS1LQ6P1R4 473 aaKnown RBP13.77□□□□□ -0.2
UBE3B-210ENST00000539599 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.2
UBE3B-210ENST00000539599 PAPD5Q8NDF8 572 aaKnown RBP13.77□□□□□ -0.2
UBE3B-210ENST00000539599 RHBDF1Q96CC6 855 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 DPY30Q9C005 99 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 AMBRA1Q9C0C7 1298 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 COMMD8Q9NX08 183 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 SZT2Q5T011 3432 aa13.77□□□□□ -0.2
UBE3B-210ENST00000539599 H7C0S8 307 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 PRSS23O95084 383 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 OTCP00480 354 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CST1P01037 141 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ALPLP05186 524 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF7P17097 686 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 EPORP19235 508 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 TUFMP49411 452 aaKnown RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 HSPA14Q0VDF9 509 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 DCTN2Q13561 401 aaKnown RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CHST9Q7L1S5 443 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CRIPAKQ8N1N5 446 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ZBTB2Q8N680 514 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 SLC22A17Q8WUG5 538 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 TANKQ92844 425 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 EBPLQ9BY08 206 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 FAM126AQ9BYI3 521 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ING2Q9H160 280 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 PCDHGA8Q9Y5G5 932 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 GLYATL1P3A0A0U1RQE8 302 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 PFDN6O15212 129 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 GREM1O60565 184 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 MITFO75030 526 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 PGRP06401 933 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CYP4B1P13584 511 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 IL1RL1Q01638 556 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CTU2Q2VPK5 515 aaKnown RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 SULT1C3Q6IMI6 304 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 SERPINA13PQ6UXR4 307 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 USP51Q70EK9 711 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF551Q7Z340 670 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 GALNT5Q7Z7M9 940 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ZC3H7AQ8IWR0 971 aaKnown RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 BBS7Q8IWZ6 715 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 DPP10Q8N608 796 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 LMNTD1Q8N9Z9 388 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-210ENST00000539599 TNIP2Q8NFZ5 429 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 NETO1Q8TDF5 533 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 FAM162AQ96A26 154 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ULK4Q96C45 1275 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 OR52E6Q96RD3 313 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 BDH2Q9BUT1 245 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 ACPTQ9BZG2 426 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CD244Q9BZW8 370 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 CWH43Q9H720 699 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 VNN3Q9NY84 501 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 GPRC5BQ9NZH0 403 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 SRRDQ9UH36 339 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 PCDHB14Q9Y5E9 798 aa13.77□□□□□ -0.21
UBE3B-210ENST00000539599 VCANP13611 3396 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PFDN1O60925 122 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ULK1O75385 1050 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF821O75541 412 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PDYNP01213 254 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 TRBC1P01850 177 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 FCGR1AP12314 374 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PFKLP17858 780 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ITPKAP23677 461 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PSMA3P25788 255 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ACRV1P26436 265 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 B4GALNT1Q00973 533 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 CHRNB3Q05901 458 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 BCL2L1Q07817 233 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ATP13A5Q4VNC0 1218 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 EFL1Q7Z2Z2 1120 aaKnown RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 R3HCC1LQ7Z5L2 792 aaKnown RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 BEND7Q8N7W2 519 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PDPRQ8NCN5 879 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PNPT1Q8TCS8 783 aaKnown RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 OSCP1Q8WVF1 389 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms