RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF280BQ86YH2 543 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 HIPK1Q86Z02 1210 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PLPP6Q8IY26 295 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ARL10Q8N8L6 244 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 LPCAT1Q8NF37 534 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 DNAJB8Q8NHS0 232 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TAMM41Q96BW9 452 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 CEP295NLQ96MC4 621 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 SPON2Q9BUD6 331 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ADGRE3Q9BY15 652 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 DPY30Q9C005 99 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 SARS2Q9NP81 518 aaKnown RBP9.48□□□□□ -0.89
CDH13-204ENST00000539548 NMRK2Q9NPI5 230 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 NECTIN3Q9NQS3 549 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 MTRRQ9UBK8 725 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 DAPK2Q9UIK4 370 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ZMYM5Q9UJ78 669 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 AGO1Q9UL18 857 aaKnown RBP9.48□□□□□ -0.89
CDH13-204ENST00000539548 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ORC6Q9Y5N6 252 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 RAI2Q9Y5P3 530 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 GOLGA8CPA6NN73 597 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 FAM220BPB1ANY3 271 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 H3BNC9 293 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 SLC22A1O15245 554 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 RAD51BO15315 384 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TAPBPO15533 448 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 FFAR2O15552 330 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 WDR47O94967 919 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PGRP06401 933 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PRKACGP22612 351 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 SLC6A4P31645 630 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 GNPDA1P46926 289 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 GZMMP51124 257 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 KCNQ1P51787 676 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 CDH4P55283 916 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 RPL38P63173 70 aaKnown RBP9.48□□□□□ -0.89
CDH13-204ENST00000539548 DSC1Q08554 894 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PTGR1Q14914 329 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 CACHD1Q5VU97 1274 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 C9orf131Q5VYM1 1079 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 SLCO6A1Q86UG4 719 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TTC9BQ8N6N2 239 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 ATAD1Q8NBU5 361 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TBC1D20Q96BZ9 403 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PSD2Q9BQI7 771 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 TBCDQ9BTW9 1192 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 CLMPQ9H6B4 373 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 KAT8Q9H7Z6 458 aaKnown RBP9.48□□□□□ -0.89
CDH13-204ENST00000539548 BPIFA1Q9NP55 256 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 HECAQ9UBI9 543 aaPredicted RBP9.48□□□□□ -0.89
CDH13-204ENST00000539548 INVSQ9Y283 1065 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 SH3BP1Q9Y3L3 701 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PCDHB1Q9Y5F3 818 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 PCDHGC4Q9Y5F7 938 aa9.48□□□□□ -0.89
CDH13-204ENST00000539548 IQCF5A8MTL0 148 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ACSL4O60488 711 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 E2F6O75461 281 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 RECQL5O94762 991 aaPredicted RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 ZDHHC11BP0C7U3 371 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 JUNDP17535 347 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 NR4A1P22736 598 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 HPCAL1P37235 193 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 HALP42357 657 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 MAGEA10P43363 369 aaPredicted RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 HUNKP57058 714 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 CACNG1Q06432 222 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 SPANXN4Q5MJ08 99 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 BTLAQ7Z6A9 289 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 CHPFQ8IZ52 775 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 LIX1Q8N485 282 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 SETD9Q8NE22 299 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 OR7A2PQ8NGA2 310 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 YIPF6Q96EC8 236 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 PYURFQ96I23 114 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 EXOC2Q96KP1 924 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 OR52E6Q96RD3 313 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 CCDC90BQ9GZT6 254 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 DUSP21Q9H596 190 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 CCSER2Q9H7U1 834 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 FBXO8Q9NRD0 319 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ELOVL2Q9NXB9 296 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ITGB1BP2Q9UKP3 347 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 INTS6Q9UL03 887 aaKnown RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 ZFP37Q9Y6Q3 630 aaPredicted RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 HSPE1-MOB4S4R3N1 261 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 M0R3G1 203 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 PRMT5O14744 637 aaPredicted RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 BCKDKO14874 412 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ERN1O75460 977 aaKnown RBP9.47□□□□□ -0.89
CDH13-204ENST00000539548 JRKO75564 520 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 ALOX5P09917 674 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 PFKLP17858 780 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 RXRGP48443 463 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 HSPA7P48741 367 aa9.47□□□□□ -0.89
CDH13-204ENST00000539548 CXCR4P61073 352 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms