RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
CD9-208ENST00000538834 C2CD4AQ8NCU7 369 aaPredicted RBP13.32□□□□□ -0.28
CD9-208ENST00000538834 OR5AR1Q8NGP9 310 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 JPH3Q8WXH2 748 aaPredicted RBP13.32□□□□□ -0.28
CD9-208ENST00000538834 UBXN4Q92575 508 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 ZDHHC12Q96GR4 267 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 FERD3LQ96RJ6 166 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 MCMBPQ9BTE3 642 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 MOCS1Q9NZB8 636 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 FAM8A1Q9UBU6 413 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 POMT2Q9UKY4 750 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 ICKQ9UPZ9 632 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 B3GALT1Q9Y5Z6 326 aa13.32□□□□□ -0.28
CD9-208ENST00000538834 TLCD2A6NGC4 264 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 IFRD1O00458 451 aaPredicted RBP13.31□□□□□ -0.28
CD9-208ENST00000538834 EFSO43281 561 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 PRICKLE3O43900 615 aaPredicted RBP13.31□□□□□ -0.28
CD9-208ENST00000538834 KRT37O76014 449 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 C1QAP02745 245 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 ELK3P41970 407 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 SLC1A2P43004 574 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
CD9-208ENST00000538834 RAB15P59190 212 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 CTBP1Q13363 440 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 ZNF470Q6ECI4 717 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 ZNF449Q6P9G9 518 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 UNC5DQ6UXZ4 953 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 UNC5AQ6ZN44 842 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 MAATS1Q7Z4T9 603 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 PDIK1LQ8N165 341 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 D2HGDHQ8N465 521 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 CALML6Q8TD86 181 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 TGM7Q96PF1 710 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 MAP3K3Q99759 626 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 TSSK1BQ9BXA7 367 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 PHACTR1Q9C0D0 580 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 CHRNA10Q9GZZ6 450 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 PRORYQ9H606 182 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 HRASLS2Q9NWW9 162 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 AKAP7Q9P0M2 348 aaPredicted RBP13.31□□□□□ -0.28
CD9-208ENST00000538834 POLG2Q9UHN1 485 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 FBXO5Q9UKT4 447 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 BTRCQ9Y297 605 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 VPS9D1Q9Y2B5 631 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 CRYL1Q9Y2S2 319 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 SNX24Q9Y343 169 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 TMEM184BQ9Y519 407 aaPredicted RBP13.31□□□□□ -0.28
CD9-208ENST00000538834 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
CD9-208ENST00000538834 OR6C74A6NCV1 312 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 EFCAB7A8K855 629 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 A8MU76 341 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 MATN2O00339 956 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 BTN3A1O00481 513 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 NIPSNAP2O75323 286 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 HAUS5O94927 633 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 APOA4P06727 396 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 FGF5P12034 268 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 FMO4P31512 558 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 MAPK9P45984 424 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 EIF3BP55884 814 aaKnown RBP13.3□□□□□ -0.28
CD9-208ENST00000538834 C2orf54Q08AI8 447 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 HSPA14Q0VDF9 509 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 BRD3Q15059 726 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 HIF1AQ16665 826 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 HSP90AA5PQ58FG0 334 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 TEDDM1Q5T9Z0 273 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 CACHD1Q5VU97 1274 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 PTRHD1Q6GMV3 140 aaKnown RBP13.3□□□□□ -0.28
CD9-208ENST00000538834 CYHR1Q6ZMK1 362 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 KIAA0408Q6ZU52 694 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 NEK10Q6ZWH5 1172 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 CYS1Q717R9 158 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 KCNMB4Q86W47 210 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 OOSP2Q86WS3 158 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 BBOF1Q8ND07 529 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 GIMAP7Q8NHV1 300 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 KCNJ9Q92806 393 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 ART4Q93070 314 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 CERS2Q96G23 380 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 C16orf45Q96MC5 204 aaPredicted RBP13.3□□□□□ -0.28
CD9-208ENST00000538834 TEFMQ96QE5 360 aaKnown RBP13.3□□□□□ -0.28
CD9-208ENST00000538834 SLC30A3Q99726 388 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 ZPBPQ9BS86 351 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 ASPSCR1Q9BZE9 553 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 APMAPQ9HDC9 416 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 C1GALT1Q9NS00 363 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 C20orf96Q9NUD7 363 aaPredicted RBP13.3□□□□□ -0.28
CD9-208ENST00000538834 PILRAQ9UKJ1 303 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 ASF1AQ9Y294 204 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 COMMD10Q9Y6G5 202 aa13.3□□□□□ -0.28
CD9-208ENST00000538834 UBA6A0AVT1 1052 aaPredicted RBP13.29□□□□□ -0.28
CD9-208ENST00000538834 NDC80O14777 642 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 PFDN6O15212 129 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 EIF3HO15372 352 aaKnown RBP eCLIP13.29□□□□□ -0.28
CD9-208ENST00000538834 DLGAP3O95886 979 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 AHSGP02765 367 aa13.29□□□□□ -0.28
CD9-208ENST00000538834 LIPCP11150 499 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms