RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ALX3O95076 343 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 SNX4O95219 450 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 MED26O95402 600 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 PEX11BO96011 259 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 NCF1P14598 390 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 RENBPP51606 427 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 MAXP61244 160 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 RAD51Q06609 339 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 MAD2L1BPQ15013 274 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 KIAA0040Q15053 153 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 XKR4Q5GH76 650 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 MARCH8Q5T0T0 291 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 NUDT8Q8WV74 236 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 FCGR1BQ92637 280 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 TBCDQ9BTW9 1192 aa18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 TMA7Q9Y2S6 64 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-207ENST00000538548 CDC7O00311 574 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 ZW10O43264 779 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 CREG1O75629 220 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 RHOBTB1O94844 696 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 MMP2P08253 660 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 OGNP20774 298 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 EFNA1P20827 205 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 LIPAP38571 399 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 CLCNKBP51801 687 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 GJC2Q5T442 439 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 RTL3Q8N8U3 475 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 GTF2H4Q92759 462 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 PEX13Q92968 403 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 ZNF382Q96SR6 550 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 MYBPHLA2RUH7 354 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 RECQL5O94762 991 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 PGLSO95336 258 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 IGLV3-25P01717 112 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 PRKCAP17252 672 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 HTR3AP46098 478 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 STC1P52823 247 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 OR2B6P58173 313 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 GRIK4Q16099 956 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 BRMS1LQ5PSV4 323 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 FCRL2Q96LA5 508 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 CDADC1Q9BWV3 514 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 DDX28Q9NUL7 540 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 TAS2R13Q9NYV9 303 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 MKLN1Q9UL63 735 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 RNF6Q9Y252 685 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 CARD8Q9Y2G2 431 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 AP3M1Q9Y2T2 418 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 POLR3HQ9Y535 204 aaPredicted RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 PCDHGB6Q9Y5F9 930 aa18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 MRPL42Q9Y6G3 142 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-207ENST00000538548 ANKRD36A6QL64 1941 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 ASB14A6NK59 587 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 EIF3FO00303 357 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 DBTP11182 482 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 AKT1P31749 480 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 KRT20P35900 424 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 MRPS15P82914 257 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 EIF4EBP2Q13542 120 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 CDK10Q15131 360 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 SYT16Q17RD7 645 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 AAK1Q2M2I8 961 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 KDM4DQ6B0I6 523 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 SPATC1Q76KD6 591 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 TSPYL5Q86VY4 417 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 DCBLD1Q8N8Z6 715 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 TBC1D20Q96BZ9 403 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 ITM2CQ9NQX7 267 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 CATSPERZQ9NTU4 200 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 FBXL12Q9NXK8 326 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 VNN3Q9NY84 501 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 CCDC59Q9P031 241 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 NDRG4Q9ULP0 352 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 ANGPTL3Q9Y5C1 460 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 PTCH2Q9Y6C5 1203 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 SERPINA1P01009 418 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 ATXN1LP0C7T5 689 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 IL1RL1Q01638 556 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 DSC2Q02487 901 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 IHHQ14623 411 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 ARTNQ5T4W7 220 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 RNF39Q9H2S5 420 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 FAM50BQ9Y247 325 aa18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 COL4A4P53420 1690 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-207ENST00000538548 NPEPPSL1A6NEC2 478 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 BTN3A1O00481 513 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 E2F3O00716 465 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 DSCR3O14972 297 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 IRAK2O43187 625 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 RPP40O75818 363 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 CTSKP43235 329 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 MAGEA2P43356 314 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 DAPP51397 102 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 NR6A1Q15406 480 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 MAPKAPK3Q16644 382 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 PROX2Q3B8N5 592 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 ZFP69Q49AA0 526 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 SETMARQ53H47 684 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms