RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 FNDC3BQ53EP0 1204 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 TATDN1Q6P1N9 297 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CHRDL2Q6WN34 429 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CYP4V2Q6ZWL3 525 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 PAQR7Q86WK9 346 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CHCHD4Q8N4Q1 142 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 NAT8LQ8N9F0 302 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZBTB45Q96K62 511 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 HSD17B14Q9BPX1 270 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SPATA9Q9BWV2 254 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 FNIP2Q9P278 1114 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PHF24Q9UPV7 400 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 GRID2O43424 1007 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RASAL1O95294 804 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RHOQP17081 205 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SOX10P56693 466 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 GPR158Q5T848 1215 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SLC30A10Q6XR72 485 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 ELMOD2Q8IZ81 293 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SPATA6LQ8N4H0 392 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TMBIM1Q969X1 311 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PYURFQ96I23 114 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PKP2Q99959 881 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZNF471Q9BX82 626 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 SPATC1LQ9H0A9 340 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 OAZ3Q9UMX2 235 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 MST1RQ04912 1400 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PPLO60437 1756 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SMCO3A2RU48 225 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 EME2A4GXA9 379 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 FAM159BA6NKW6 160 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 NOBOXO60393 691 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 RECQL4O94761 1208 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 C4BPAP04003 597 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 ANXA4P09525 319 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 ANXA3P12429 323 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZNF3P17036 446 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PRPS1L1P21108 318 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ACVR2AP27037 513 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PTGER3P43115 390 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PSMA6P60900 246 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 RPA4Q13156 261 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SEC23BQ15437 767 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ATP6AP1Q15904 470 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TBRG1Q3YBR2 411 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SNX20Q7Z614 316 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZNF227Q86WZ6 799 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PRMT6Q96LA8 375 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 TM9SF2Q99805 663 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 FOLH1BQ9HBA9 442 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SPIN1Q9Y657 262 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 NRCAMQ92823 1304 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 GLYATL1P3A0A0U1RQE8 302 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 M0R036 132 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 PRKYO43930 277 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TRIM3O75382 744 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 CLDN11O75508 207 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 DCKP27707 260 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 UGT2B10P36537 528 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 THOP1P52888 689 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 DNAJB13P59910 316 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 VAMP2P63027 116 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TCEAL1Q15170 157 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 SYT16Q17RD7 645 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CELF3Q5SZQ8 465 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 KIAA1614Q5VZ46 1190 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 TCEAL6Q6IPX3 200 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CFAP206Q8IYR0 622 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ARMC10Q8N2F6 343 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CHST4Q8NCG5 386 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 OR2L3Q8NG85 312 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 BTN2A3PQ96KV6 586 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 APOLD1Q96LR9 279 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 GAD1Q99259 594 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 ZNF717Q9BY31 904 aaPredicted RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 SLC29A3Q9BZD2 475 aa6.81□□□□□ -1.32
SORT1-209ENST00000538502 MRM3Q9HC36 420 aaKnown RBP6.81□□□□□ -1.32
SORT1-209ENST00000538502 NT5C1B-RDH14C9J2C7 533 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 H3BM21 787 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 PCDHGA12O60330 932 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 UPP2O95045 317 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CYP3A5P20815 502 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 AGTR1P30556 359 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 HSD17B2P37059 387 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 SCNN1AP37088 669 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 GNALP38405 381 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 HNRNPFP52597 415 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 WDR4P57081 412 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 RASGEF1BQ0VAM2 473 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 CBFBQ13951 182 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 FASTKD3Q14CZ7 662 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 CEP295NLQ96MC4 621 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TNKS2Q9H2K2 1166 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 AGO3Q9H9G7 860 aaKnown RBP6.8□□□□□ -1.32
SORT1-209ENST00000538502 COPZ2Q9P299 210 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 TESMINQ9Y4I5 508 aa6.8□□□□□ -1.32
SORT1-209ENST00000538502 IQCMA0A1B0GVH7 501 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms