RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 GRID2O43424 1007 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 NUDT17P0C025 328 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CTSAP10619 480 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PIM1P11309 404 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 ETV3P41162 512 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 YAP1P46937 504 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 SLC7A2P52569 658 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PNLIPRP1P54315 467 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 MLLT6P55198 1093 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 ZNF805Q5CZA5 627 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PTCHD4Q6ZW05 846 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 GALNT7Q86SF2 657 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PTCD3Q96EY7 689 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 RMND5BQ96G75 393 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 CDKN2AIPNLQ96HQ2 116 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TRMOQ9BU70 441 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PTGFRNQ9P2B2 879 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 COL16A1Q07092 1604 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 MGRN1O60291 552 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CLPTM1O96005 669 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 HEXBP07686 556 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 AHCYP23526 432 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SERPINB1P30740 379 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 GRIA2P42262 883 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 KCNJ5P48544 419 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PSMD4P55036 377 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 PARP8Q8N3A8 854 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 OR2T12Q8NG77 320 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 RNF121Q9H920 327 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 B4GALT6Q9UBX8 382 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SERTAD3Q9UJW9 196 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 C4AP0C0L4 1744 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 LOC100506127A0A0U1RQW1 187 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 HAS3O00219 553 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CDC7O00311 574 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TRIM24O15164 1050 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PCDH7O60245 1069 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PRAMEF11O60813 436 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CEBPBP17676 345 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PREPP48147 710 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CLCN7P51798 805 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 OGDHQ02218 1023 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 MLLT1Q03111 559 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 BNIP2Q12982 314 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TOP3AQ13472 1001 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 SERINC3Q13530 473 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 COLEC12Q5KU26 742 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PDZK1Q5T2W1 519 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 REP15Q6BDI9 236 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 KIAA0930Q6ICG6 404 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 SLC30A6Q6NXT4 461 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 GALNT18Q6P9A2 607 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TRMT10BQ6PF06 316 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 AMIGO2Q86SJ2 522 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PLEKHO2Q8TD55 490 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 KIAA1143Q96AT1 154 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 ARMC5Q96C12 935 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 NEK6Q9HC98 313 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 ADAP2Q9NPF8 381 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TRPS1Q9UHF7 1281 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 GNEQ9Y223 722 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 PCDHGA11Q9Y5H2 935 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 G3V2T6 193 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 K7EPI3 171 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 MUSKO15146 869 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 KLK1P06870 262 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 JUNDP17535 347 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 USP46P62068 366 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 ARL13AQ5H913 290 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 TRIQKQ629K1 86 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SUSD1Q6UWL2 747 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 FSTL5Q8N475 847 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 CAMKVQ8NCB2 501 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 OR52J3Q8NH60 311 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 RPLP0P6Q8NHW5 317 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 NAT14Q8WUY8 206 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TFGQ92734 400 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 KAT2AQ92830 837 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 Q96MT0 163 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TGM7Q96PF1 710 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 FCRL4Q96PJ5 515 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 TEFMQ96QE5 360 aaKnown RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 FEM1AQ9BSK4 669 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.26□□□□□ -1.57
LRP6-203ENST00000538239 LMAN1LQ9HAT1 526 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SAGE1Q9NXZ1 904 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SLC22A14Q9Y267 594 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PCDHB3Q9Y5E6 796 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 MYH3P11055 1940 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 ZNF840PA6NDX5 716 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 IGLON5A6NGN9 336 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.26□□□□□ -1.57
LRP6-203ENST00000538239 DCLK1O15075 740 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 LDB2O43679 373 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 NRP2O60462 931 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 CD247P20963 164 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 SCNN1AP37088 669 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 PTGIRP43119 386 aa5.26□□□□□ -1.57
LRP6-203ENST00000538239 HCAR3P49019 387 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms