RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 GTPBP10A4D1E9 387 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 H7C1Q1 480 aa8.82□□□□□ -1
USP28-205ENST00000537706 ATE1O95260 518 aa8.82□□□□□ -1
USP28-205ENST00000537706 F10P00742 488 aa8.82□□□□□ -1
USP28-205ENST00000537706 SERPINA7P05543 415 aa8.82□□□□□ -1
USP28-205ENST00000537706 PDHA1P08559 390 aa8.82□□□□□ -1
USP28-205ENST00000537706 PRR35P0CG20 571 aa8.82□□□□□ -1
USP28-205ENST00000537706 KRT3P12035 628 aa8.82□□□□□ -1
USP28-205ENST00000537706 BMP7P18075 431 aa8.82□□□□□ -1
USP28-205ENST00000537706 MSNP26038 577 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 PRDX3P30048 256 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 MAXP61244 160 aa8.82□□□□□ -1
USP28-205ENST00000537706 TFDP3Q5H9I0 405 aa8.82□□□□□ -1
USP28-205ENST00000537706 TAF3Q5VWG9 929 aa8.82□□□□□ -1
USP28-205ENST00000537706 ALS2CLQ60I27 953 aa8.82□□□□□ -1
USP28-205ENST00000537706 ATG9BQ674R7 924 aa8.82□□□□□ -1
USP28-205ENST00000537706 ARHGAP36Q6ZRI8 547 aa8.82□□□□□ -1
USP28-205ENST00000537706 TRIM59Q8IWR1 403 aa8.82□□□□□ -1
USP28-205ENST00000537706 SIRT6Q8N6T7 355 aa8.82□□□□□ -1
USP28-205ENST00000537706 CPA5Q8WXQ8 436 aa8.82□□□□□ -1
USP28-205ENST00000537706 DHTKD1Q96HY7 919 aaPredicted RBP8.82□□□□□ -1
USP28-205ENST00000537706 C12orf66Q96MD2 445 aa8.82□□□□□ -1
USP28-205ENST00000537706 TIGD1Q96MW7 591 aa8.82□□□□□ -1
USP28-205ENST00000537706 NUP85Q9BW27 656 aa8.82□□□□□ -1
USP28-205ENST00000537706 SPRTNQ9H040 489 aaPredicted RBP8.82□□□□□ -1
USP28-205ENST00000537706 SAMSN1Q9NSI8 373 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 NOCTQ9UK39 431 aaKnown RBP8.82□□□□□ -1
USP28-205ENST00000537706 HPSEQ9Y251 543 aa8.82□□□□□ -1
USP28-205ENST00000537706 RNF6Q9Y252 685 aa8.82□□□□□ -1
USP28-205ENST00000537706 ZKSCAN5Q9Y2L8 839 aa8.82□□□□□ -1
USP28-205ENST00000537706 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
USP28-205ENST00000537706 CACNA1CQ13936 2221 aa8.81□□□□□ -1
USP28-205ENST00000537706 BICDL2A1A5D9 508 aa8.81□□□□□ -1
USP28-205ENST00000537706 C2orf74A8MZ97 194 aa8.81□□□□□ -1
USP28-205ENST00000537706 SMAD7O15105 426 aaKnown RBP8.81□□□□□ -1
USP28-205ENST00000537706 FZD6O60353 706 aa8.81□□□□□ -1
USP28-205ENST00000537706 SMC2O95347 1197 aa8.81□□□□□ -1
USP28-205ENST00000537706 PTMAP06454 111 aaKnown RBP8.81□□□□□ -1
USP28-205ENST00000537706 CXCR2P25025 360 aa8.81□□□□□ -1
USP28-205ENST00000537706 KIR2DL3P43628 341 aa8.81□□□□□ -1
USP28-205ENST00000537706 ZNF165P49910 485 aa8.81□□□□□ -1
USP28-205ENST00000537706 FOXL2P58012 376 aa8.81□□□□□ -1
USP28-205ENST00000537706 PCBP2Q15366 365 aaKnown RBP eCLIP8.81□□□□□ -1
USP28-205ENST00000537706 NKG7Q16617 165 aa8.81□□□□□ -1
USP28-205ENST00000537706 NAA35Q5VZE5 725 aa8.81□□□□□ -1
USP28-205ENST00000537706 ARSKQ6UWY0 536 aa8.81□□□□□ -1
USP28-205ENST00000537706 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
USP28-205ENST00000537706 ACAD11Q709F0 780 aa8.81□□□□□ -1
USP28-205ENST00000537706 LUZP1Q86V48 1076 aa8.81□□□□□ -1
USP28-205ENST00000537706 ARHGAP12Q8IWW6 846 aa8.81□□□□□ -1
USP28-205ENST00000537706 LPCAT1Q8NF37 534 aa8.81□□□□□ -1
USP28-205ENST00000537706 JOSD2Q8TAC2 188 aa8.81□□□□□ -1
USP28-205ENST00000537706 LCN9Q8WX39 176 aa8.81□□□□□ -1
USP28-205ENST00000537706 LYSMD1Q96S90 227 aa8.81□□□□□ -1
USP28-205ENST00000537706 CRACR2AQ9BSW2 395 aa8.81□□□□□ -1
USP28-205ENST00000537706 CNPY3Q9BT09 278 aa8.81□□□□□ -1
USP28-205ENST00000537706 CRB3Q9BUF7 120 aa8.81□□□□□ -1
USP28-205ENST00000537706 XPO4Q9C0E2 1151 aaKnown RBP8.81□□□□□ -1
USP28-205ENST00000537706 SOX17Q9H6I2 414 aaPredicted RBP8.81□□□□□ -1
USP28-205ENST00000537706 ANO10Q9NW15 660 aa8.81□□□□□ -1
USP28-205ENST00000537706 IL1RAPL1Q9NZN1 696 aa8.81□□□□□ -1
USP28-205ENST00000537706 JMJD1CQ15652 2540 aa8.8□□□□□ -1
USP28-205ENST00000537706 FAM170AA1A519 330 aa8.8□□□□□ -1
USP28-205ENST00000537706 FGFR1OPO95684 399 aaKnown RBP8.8□□□□□ -1
USP28-205ENST00000537706 TPOP07202 933 aa8.8□□□□□ -1
USP28-205ENST00000537706 EEF1DP29692 281 aaKnown RBP8.8□□□□□ -1
USP28-205ENST00000537706 ZNF135P52742 658 aaPredicted RBP8.8□□□□□ -1
USP28-205ENST00000537706 DCDC1P59894 354 aa8.8□□□□□ -1
USP28-205ENST00000537706 EXOC3L4Q17RC7 722 aa8.8□□□□□ -1
USP28-205ENST00000537706 NDUFAF7Q7L592 441 aa8.8□□□□□ -1
USP28-205ENST00000537706 ZNF547Q8IVP9 402 aa8.8□□□□□ -1
USP28-205ENST00000537706 PGBD5Q8N414 524 aa8.8□□□□□ -1
USP28-205ENST00000537706 TMEM178AQ8NBL3 297 aa8.8□□□□□ -1
USP28-205ENST00000537706 PITPNM3Q9BZ71 974 aa8.8□□□□□ -1
USP28-205ENST00000537706 POLR1EQ9GZS1 481 aaKnown RBP8.8□□□□□ -1
USP28-205ENST00000537706 KLHL25Q9H0H3 589 aa8.8□□□□□ -1
USP28-205ENST00000537706 TSPAN10Q9H1Z9 355 aaPredicted RBP8.8□□□□□ -1
USP28-205ENST00000537706 SLC26A1Q9H2B4 701 aa8.8□□□□□ -1
USP28-205ENST00000537706 DEF6Q9H4E7 631 aa8.8□□□□□ -1
USP28-205ENST00000537706 TRPS1Q9UHF7 1281 aa8.8□□□□□ -1
USP28-205ENST00000537706 DNAJC12Q9UKB3 198 aa8.8□□□□□ -1
USP28-205ENST00000537706 L3MBTL1Q9Y468 752 aa8.8□□□□□ -1
USP28-205ENST00000537706 CFAP20Q9Y6A4 193 aaKnown RBP8.8□□□□□ -1
USP28-205ENST00000537706 FN1P02751 2386 aaKnown RBP8.8□□□□□ -1
USP28-205ENST00000537706 A0A1B0GX78 115 aa8.8□□□□□ -1
USP28-205ENST00000537706 FOXN3O00409 490 aaPredicted RBP8.8□□□□□ -1
USP28-205ENST00000537706 ADAM10O14672 748 aa8.8□□□□□ -1
USP28-205ENST00000537706 RASGRF2O14827 1237 aa8.8□□□□□ -1
USP28-205ENST00000537706 MTX2O75431 263 aa8.8□□□□□ -1
USP28-205ENST00000537706 POP7O75817 140 aaKnown RBP8.8□□□□□ -1
USP28-205ENST00000537706 SLC35G4P0C7Q5 338 aa8.8□□□□□ -1
USP28-205ENST00000537706 ICAM2P13598 275 aa8.8□□□□□ -1
USP28-205ENST00000537706 CD46P15529 392 aa8.8□□□□□ -1
USP28-205ENST00000537706 ERCC2P18074 760 aa8.8□□□□□ -1
USP28-205ENST00000537706 CDH6P55285 790 aa8.8□□□□□ -1
USP28-205ENST00000537706 DCAF7P61962 342 aa8.8□□□□□ -1
USP28-205ENST00000537706 OCA2Q04671 838 aa8.8□□□□□ -1
USP28-205ENST00000537706 TMEM115Q12893 351 aaPredicted RBP8.8□□□□□ -1
USP28-205ENST00000537706 CBLBQ13191 982 aa8.8□□□□□ -1
USP28-205ENST00000537706 RFX8Q6ZV50 586 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms