RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PARVBQ9HBI1 364 aa17.08■□□□□ 0.32
SNX17-210ENST00000537606 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.32
SNX17-210ENST00000537606 SMOXQ9NWM0 555 aa17.08■□□□□ 0.32
SNX17-210ENST00000537606 SLAMF8Q9P0V8 285 aa17.08■□□□□ 0.32
SNX17-210ENST00000537606 EPS15L1Q9UBC2 864 aa17.08■□□□□ 0.32
SNX17-210ENST00000537606 DKK3Q9UBP4 350 aa17.08■□□□□ 0.32
SNX17-210ENST00000537606 ASPDHA6ND91 283 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 TBC1D3BA6NDS4 549 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 K7ESM1 405 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 SPINT1O43278 529 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 TSPAN6O43657 245 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 EPORP19235 508 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 KCNK10P57789 538 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 DCDC1P59894 354 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 ABRQ12979 859 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 ZNF234Q14588 700 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 PAGE3Q5JUK9 113 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 SAMD4BQ5PRF9 694 aaKnown RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 CACUL1Q86Y37 369 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 TMEM102Q8N9M5 508 aaPredicted RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 PROKR1Q8TCW9 393 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 LRTOMTQ8WZ04 291 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 LRIG1Q96JA1 1093 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 GPATCH1Q9BRR8 931 aaKnown RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 ZSCAN5AQ9BUG6 496 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 SLC12A9Q9BXP2 914 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 EGFL7Q9UHF1 273 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 PCDHGB4Q9UN71 923 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 PCDHGB5Q9Y5G0 923 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 NUP210Q8TEM1 1887 aaPredicted RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 EME2A4GXA9 379 aaPredicted RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 LINC01565O15544 149 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 PEX1O43933 1283 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 NUAK1O60285 661 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 SLC2A4P14672 509 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 PBLDP30039 288 aaPredicted RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 PREPP48147 710 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 GBX1Q14549 363 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 TLR1Q15399 786 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 TIGD2Q4W5G0 525 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 HACD2Q6Y1H2 254 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 RAVER1Q8IY67 606 aaKnown RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 DDHD1Q8NEL9 900 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 DNAJB14Q8TBM8 379 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 GLYATL1Q969I3 302 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 POLR3HQ9Y535 204 aaPredicted RBP17.07■□□□□ 0.32
SNX17-210ENST00000537606 AP4S1Q9Y587 144 aa17.07■□□□□ 0.32
SNX17-210ENST00000537606 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ZNF839A8K0R7 811 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 BBIP1A8MTZ0 92 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 WNT9AO14904 365 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ATP6V1B2P21281 511 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ITPKAP23677 461 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 NFKBIAP25963 317 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 POLR2JP52435 117 aaKnown RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 KCNC3Q14003 757 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 HNRNPA1L2Q32P51 320 aaKnown RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 PTCHD3Q3KNS1 767 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 SLC15A3Q8IY34 581 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ROPN1LQ96C74 230 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 LRRC58Q96CX6 371 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 SAMD11Q96NU1 681 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 BRINP2Q9C0B6 783 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 YIPF3Q9GZM5 350 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ACTR8Q9H981 624 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 CMTM6Q9NX76 183 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ZNF490Q9ULM2 529 aaPredicted RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 CCDC154A6NI56 674 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 MMP20O60882 483 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 RSL1D1O76021 490 aaKnown RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 WDR47O94967 919 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 PRNPP04156 253 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 C8BP07358 591 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 FCARP24071 287 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 RPL38P63173 70 aaKnown RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 PLIN5Q00G26 463 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 RHDQ02161 417 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 TMEM115Q12893 351 aaPredicted RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 RCAN2Q14206 197 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 MAP7D1Q3KQU3 841 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 PLEKHS1Q5SXH7 462 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 VITQ6UXI7 678 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 MMAAQ8IVH4 418 aaKnown RBP17.06■□□□□ 0.32
SNX17-210ENST00000537606 UBTD2Q8WUN7 234 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 FAM129BQ96TA1 746 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 TRIM54Q9BYV2 358 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 SLC32A1Q9H598 525 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 ZFP14Q9HCL3 533 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 KLHL42Q9P2K6 505 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 SLC22A14Q9Y267 594 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 CCL27Q9Y4X3 112 aa17.06■□□□□ 0.32
SNX17-210ENST00000537606 A0A1W2PP18 115 aa17.05■□□□□ 0.32
SNX17-210ENST00000537606 ULK1O75385 1050 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms