RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SNED1Q8TER0 1413 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 A0A0A6YYJ9 748 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 hCG_1807616A0A1W2PRN6 198 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 MEIS2O14770 477 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 HUS1O60921 280 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 VPS26AO75436 327 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 MGAT1P26572 445 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 RARRES1P49788 294 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 HK3P52790 923 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 CDH8P55286 799 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 HUNKP57058 714 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 C1QTNF8P60827 252 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 ALDH6A1Q02252 535 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 NFYCQ13952 458 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 KEAP1Q14145 624 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 PDZK1Q5T2W1 519 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 SPESP1Q6UW49 350 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 KDELC1Q6UW63 502 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 SNX20Q7Z614 316 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 ADHFE1Q8IWW8 467 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 FSTL5Q8N475 847 aaPredicted RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 SRFBP1Q8NEF9 429 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 DNAJB14Q8TBM8 379 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 TSPEARQ8WU66 669 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 PYCR2Q96C36 320 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 RPL10LQ96L21 214 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 Q96MT0 163 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 SORCS2Q96PQ0 1159 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 DPYSL5Q9BPU6 564 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 SPOCK3Q9BQ16 436 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 C11orf54Q9H0W9 315 aaPredicted RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 LYARQ9NX58 379 aaKnown RBP8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 COPZ2Q9P299 210 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 PLCL2Q9UPR0 1127 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 MAB21L2Q9Y586 359 aa8.38□□□□□ -1.07
SRGAP1-202ENST00000537556 SBK3P0C264 359 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 EFNA1P20827 205 aaPredicted RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SDC4P31431 198 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 GLRBP48167 497 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 GDI2P50395 445 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RAB13P51153 203 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KPNA2P52292 529 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 DNAJB13P59910 316 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RPP38P78345 283 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CYP4F8P98187 520 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ABRQ12979 859 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 USP10Q14694 798 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 RPS6KA2Q15349 733 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 STXBP2Q15833 593 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 IER5Q5VY09 327 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MZT2BQ6NZ67 158 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 C15orf39Q6ZRI6 1047 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 BEND4Q6ZU67 534 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 LARP4Q71RC2 724 aaKnown RBP eCLIP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 LUZP2Q86TE4 346 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 JAZF1Q86VZ6 243 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 OR52N1Q8NH53 320 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CCDC126Q96EE4 140 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 C19orf60Q96EN9 201 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 TRMT61AQ96FX7 289 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KCNS3Q9BQ31 491 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MRPL57Q9BQC6 102 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 C1QTNF1Q9BXJ1 281 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SRRQ9GZT4 340 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SMURF1Q9HCE7 757 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KIF25Q9UIL4 384 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KLK4Q9Y5K2 254 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 FAM170BA6NMN3 283 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 H7C2Y5 167 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SYN3O14994 580 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 SEC14L5O43304 696 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 PMPCBO75439 489 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MICAL2O94851 1124 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CSF2P04141 144 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CAPN3P20807 821 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 POU1F1P28069 291 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KIR2DL3P43628 341 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 CLCNKAP51800 687 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ELP6Q0PNE2 266 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 EXOSC2Q13868 293 aaKnown RBP8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 FGFBP1Q14512 234 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MICAQ29983 383 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 IQCCQ4KMZ1 466 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 HES5Q5TA89 166 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 TRILQ7L0X0 811 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 OVCH2Q7RTZ1 564 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 KRT77Q7Z794 578 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 HIPK1Q86Z02 1210 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 GHDCQ8N2G8 530 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ATG16L2Q8NAA4 619 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 OR5K1Q8NHB7 308 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 ARNTL2Q8WYA1 636 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 MYLPFQ96A32 169 aa8.37□□□□□ -1.07
SRGAP1-202ENST00000537556 LINC00052Q96N35 136 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms