RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PI4KAP42356 2102 aa5.45□□□□□ -1.54
CLIP1-207ENST00000536634 URB1O60287 2271 aaKnown RBP5.45□□□□□ -1.54
CLIP1-207ENST00000536634 USP9XQ93008 2570 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 HEPACAM2A8MVW5 462 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 KDM4EB2RXH2 506 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 EIF3FO00303 357 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CDX4O14627 284 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 PTGESO14684 152 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 B4GALT5O43286 388 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 ITM2AO43736 263 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 PSMD10O75832 226 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CCDC192P0DO97 292 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CEACAM1P13688 526 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 ARF4P18085 180 aaPredicted RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 SFNP31947 248 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 TTKP33981 857 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 AMTP48728 403 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CENPAP49450 140 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CCR5P51681 352 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 NUCB1Q02818 461 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 MBTD1Q05BQ5 628 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 FAM27E3Q08E93 113 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 KEAP1Q14145 624 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 NAA25Q14CX7 972 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 PON2Q15165 354 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 NAB2Q15742 525 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 NOTUMQ6P988 496 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CD300LGQ6UXG3 332 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 BBS12Q6ZW61 710 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 MIER3Q7Z3K6 550 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 MON1AQ86VX9 555 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 SMC5Q8IY18 1101 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CLIP4Q8N3C7 705 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 LSM14AQ8ND56 463 aaKnown RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 CNNM3Q8NE01 707 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 DEFB124Q8NES8 71 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 OR14A16Q8NHC5 309 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 PSPC1Q8WXF1 523 aaKnown RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 SMARCD2Q92925 531 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 LRRC3BQ96PB8 259 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 RIT2Q99578 217 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 TEKT3Q9BXF9 490 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 SLCO5A1Q9H2Y9 848 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 DHX33Q9H6R0 707 aaKnown RBP5.44□□□□□ -1.54
CLIP1-207ENST00000536634 GTSE1Q9NYZ3 720 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 SELENONQ9NZV5 590 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 MTRRQ9UBK8 725 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 NEUROG3Q9Y4Z2 214 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 DGKBQ9Y6T7 804 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 THADAQ6YHU6 1953 aa5.44□□□□□ -1.54
CLIP1-207ENST00000536634 MYO16Q9Y6X6 1858 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 PLXNB3Q9ULL4 1909 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 IGHV4-28A0A0C4DH34 117 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 SPAARA0A1B0GVQ0 90 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ESYT2A0FGR8 921 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ARHGEF37A1IGU5 675 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 MYBPHLA2RUH7 354 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 SPECC1L-ADORA2AF8WAN1 911 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 I3L4J1 428 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF263O14978 683 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CEP104O60308 925 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TSPAN3O60637 253 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ERLIN2O94905 339 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 SEC24AO95486 1093 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TDP2O95551 362 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CAVIN2O95810 425 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ZNF12P17014 697 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 PTPN2P17706 415 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CSRP1P21291 193 aaKnown RBP5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CHMLP26374 656 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 PTENP60484 403 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ROR1Q01973 937 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CREB5Q02930 508 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 EMC2Q15006 297 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ASIC2Q16515 512 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 NCAPH2Q6IBW4 605 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 KRTAP5-11Q6L8G4 156 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 IL20RBQ6UXL0 311 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 MOB3CQ70IA8 216 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 PRSS45Q7RTY3 260 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 PATL1Q86TB9 770 aaKnown RBP5.43□□□□□ -1.54
CLIP1-207ENST00000536634 FJX1Q86VR8 437 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 MFSD6LQ8IWD5 586 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 RBMXL3Q8N7X1 1067 aaKnown RBP5.43□□□□□ -1.54
CLIP1-207ENST00000536634 RDM1Q8NG50 284 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ETNPPLQ8TBG4 499 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 DEPDC1BQ8WUY9 529 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TMEM170AQ8WVE7 144 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 SH3KBP1Q96B97 665 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CCDC51Q96ER9 411 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TCEANC2Q96MN5 208 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TRIM6Q9C030 488 aaPredicted RBP5.43□□□□□ -1.54
CLIP1-207ENST00000536634 ZMYND12Q9H0C1 365 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 GLT8D2Q9H1C3 349 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TRPV4Q9HBA0 871 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 CD93Q9NPY3 652 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 TMEM9BQ9NQ34 198 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 XPNPEP1Q9NQW7 623 aa5.43□□□□□ -1.54
CLIP1-207ENST00000536634 RBM28Q9NW13 759 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms