RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KLHL25Q9H0H3 589 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 CIDEBQ9UHD4 219 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 IL17BQ9UHF5 180 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 POMT2Q9UKY4 750 aa13.85□□□□□ -0.19
UBE3B-206ENST00000536398 TDRKHQ9Y2W6 561 aaKnown RBP13.85□□□□□ -0.19
UBE3B-206ENST00000536398 GOLGA6L10A0A0M3HER8 536 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 SDR42E2A6NKP2 422 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 FGF5P12034 268 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PVRP15151 417 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 TCP1P17987 556 aaKnown RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 CDH3P22223 829 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PPARGP37231 505 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 EIF3BP55884 814 aaKnown RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 HSD11B2P80365 405 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 RHDQ02161 417 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PRKAA1Q13131 559 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 TUBB3Q13509 450 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PPP1R7Q15435 360 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 GPR19Q15760 415 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 ANKRD20A4Q4UJ75 823 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 TAF1BQ53T94 588 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 ZNF789Q5FWF6 425 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 RNASEH2BQ5TBB1 312 aaKnown RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PAPD7Q5XG87 772 aaKnown RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PTRHD1Q6GMV3 140 aaKnown RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 PWWP2BQ6NUJ5 590 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 CREG2Q8IUH2 290 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 SLC22A15Q8IZD6 547 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 CFAP61Q8NHU2 1237 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 GRK7Q8WTQ7 553 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 ZNF669Q96BR6 464 aaPredicted RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 FAM136AQ96C01 138 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 BIRC8Q96P09 236 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 SLC12A9Q9BXP2 914 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 SEMA4CQ9C0C4 833 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 TRIT1Q9H3H1 467 aaKnown RBP13.84□□□□□ -0.19
UBE3B-206ENST00000536398 SPHK1Q9NYA1 384 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 ACTR10Q9NZ32 417 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 GALPQ9UBC7 116 aa13.84□□□□□ -0.19
UBE3B-206ENST00000536398 ZCWPW2A0A1B0GU75 182 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 FAM237BA0A1B0GVD1 139 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 ERVH48-1M5A8F1 160 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 NKX2-8O15522 239 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 BANF1O75531 89 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 ZBTB11O95625 1053 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 NTRK1P04629 796 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 MLNP12872 115 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 ST6GAL1P15907 406 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 F8A1P23610 371 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 MAP4P27816 1152 aaKnown RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 MAGEA3P43357 314 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 ARL4DP49703 201 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 LY6DQ14210 128 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 TYSND1Q2T9J0 566 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 LINC00303Q3SY05 128 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 PRAMEF17Q5VTA0 474 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 KIAA0930Q6ICG6 404 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 MRNIPQ6NTE8 343 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 NEPROQ6NW34 567 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 C6orf15Q6UXA7 325 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 CENPUQ71F23 418 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 TRIM73Q86UV7 250 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 PPP1R3BQ86XI6 285 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 TBC1D21Q8IYX1 336 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 C2orf73Q8N5S3 287 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 OR5K2Q8NHB8 316 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 ASZ1Q8WWH4 475 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 LPGAT1Q92604 370 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 EXTL1Q92935 676 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 SIGLEC10Q96LC7 697 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 NAPGQ99747 312 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 AKIRIN1Q9H9L7 192 aaPredicted RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 XAB2Q9HCS7 855 aaKnown RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 FGF21Q9NSA1 209 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 LNPEPQ9UIQ6 1025 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 GNPTGQ9UJJ9 305 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 RARRES3Q9UL19 164 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 CRYL1Q9Y2S2 319 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 MRPS18BQ9Y676 258 aaKnown RBP13.83□□□□□ -0.2
UBE3B-206ENST00000536398 MAD1L1Q9Y6D9 718 aa13.83□□□□□ -0.2
UBE3B-206ENST00000536398 KRT87PA6NCN2 255 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 NIPSNAP2O75323 286 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 C1QL1O75973 258 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 SLCO2B1O94956 709 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 S1PR4O95977 384 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 APOA4P06727 396 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 CHRM5P08912 532 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 RPS3P23396 243 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 IVDP26440 423 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 PLOD1Q02809 727 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 ABHD18Q0P651 414 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 PTK6Q13882 451 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 COL9A2Q14055 689 aaPredicted RBP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 GRB7Q14451 532 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE3B-206ENST00000536398 MSS51Q4VC12 460 aa13.82□□□□□ -0.2
UBE3B-206ENST00000536398 SDCCAG8Q86SQ7 713 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms