RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 C17orf113A0A1B0GUU1 675 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 BTN3A3O00478 584 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 KDM1AO60341 852 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZRANB2O95218 330 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CAPN1P07384 714 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PVRP15151 417 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 DCTP40126 519 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 MYBPC3Q14896 1274 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ASTE1Q2TB18 679 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZNF789Q5FWF6 425 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 C1orf189Q5VU69 101 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SPESP1Q6UW49 350 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CDHR3Q6ZTQ4 885 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 NXPE1Q8N323 547 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 LILRA3Q8N6C8 439 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 C19orf47Q8N9M1 422 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TTC13Q8NBP0 860 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PROKR1Q8TCW9 393 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 C19orf60Q96EN9 201 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PPP1R2P1Q96PQ5 205 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TRAPPC9Q96Q05 1148 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 APOL2Q9BQE5 337 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TFB2MQ9H5Q4 396 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 NHEJ1Q9H9Q4 299 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ABHD10Q9NUJ1 306 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ASF1BQ9NVP2 202 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ACTR10Q9NZ32 417 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 COPG1Q9Y678 874 aaKnown RBP12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CREBBPQ92793 2442 aa12.56□□□□□ -0.4
TNFRSF1A-207ENST00000535958 hCG_1818297A0A087WSY0 165 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZSCAN9O15535 394 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 LDLRP01130 860 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 COL8A1P27658 744 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 MC4RP32245 332 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GLRBP48167 497 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CD151P48509 253 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 DCDP81605 110 aaKnown RBP12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 RPA4Q13156 261 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PRKG2Q13237 762 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 NAA30Q147X3 362 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SLC9A5Q14940 896 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 DEFB110Q30KQ9 67 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PLEKHN1Q494U1 663 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SYTL3Q4VX76 610 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TAS2R42Q7RTR8 314 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CDKL3Q8IVW4 592 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 OR13C4Q8NGS5 318 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TFGQ92734 400 aaPredicted RBP12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TCTN2Q96GX1 697 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 NDC1Q9BTX1 674 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 FAM96AQ9H5X1 160 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 XKR8Q9H6D3 395 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
TNFRSF1A-207ENST00000535958 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 QSOX1O00391 747 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CBX6O95503 412 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CLDN1O95832 211 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 APOC2P02655 101 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GSTM1P09488 218 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ITGA3P26006 1051 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PSMB4P28070 264 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 RBL1P28749 1068 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SHMT2P34897 504 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PER3P56645 1201 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GSTM4Q03013 218 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GPR33Q49SQ1 333 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 KATNAL2Q8IYT4 538 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 RCOR2Q8IZ40 523 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PHC3Q8NDX5 983 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 OR2Y1Q8NGV0 311 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 OR52A5Q9H2C5 316 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ATP13A2Q9NQ11 1180 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 P4HTMQ9NXG6 502 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 INTUQ9ULD6 942 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ASF1AQ9Y294 204 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TDRKHQ9Y2W6 561 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 HIVEP3Q5T1R4 2406 aa12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PRRC2CQ9Y520 2896 aaKnown RBP12.54□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SPTBP11277 2137 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SEC16AO15027 2179 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 A0A0J9YY10 115 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SGTAO43765 313 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 KLF7O75840 302 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CBSLP0DN79 551 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 UGT2B7P16662 529 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ACRV1P26436 265 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CBSP35520 551 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 XIAPP98170 497 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 BOP1Q14137 746 aaKnown RBP12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TAZQ16635 292 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TLDC1Q6P9B6 456 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TRIM73Q86UV7 250 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ADGRF3Q8IZF5 1079 aa12.53□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZNF655Q8N720 491 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms