RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 RASGEF1CQ8N431 466 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 ACVR1CQ8NER5 493 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 OR6P1Q8NGX9 317 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 OR4L1Q8NH43 312 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 LCN9Q8WX39 176 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 RNF31Q96EP0 1072 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 SGSM3Q96HU1 749 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 ELMO2Q96JJ3 720 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 PPM1MQ96MI6 270 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 NRTNQ99748 197 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 HGH1Q9BTY7 390 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 SLC12A9Q9BXP2 914 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 ULBP3Q9BZM4 244 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 SEMA4CQ9C0C4 833 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 IL22Q9GZX6 179 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 MVB12BQ9H7P6 319 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 GPN2Q9H9Y4 310 aaPredicted RBP8.6□□□□□ -1.03
CHD4-204ENST00000535810 CHRAC1Q9NRG0 131 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 HOMER3Q9NSC5 361 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 TREX1Q9NSU2 369 aa8.6□□□□□ -1.03
CHD4-204ENST00000535810 SPTAN1Q13813 2472 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 LOC101059948A0A1B0GTJ6 334 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TCRBV7S3A2A0A539 114 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 UBA6A0AVT1 1052 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 SLC5A10A0PJK1 596 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 BTN3A3O00478 584 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TIAF1O95411 115 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 FTH1P02794 183 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 OR56A5P0C7T3 313 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 EBLN1P0CF75 366 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 POLR2CP19387 275 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 TPSB2P20231 275 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 STAT5AP42229 794 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 CSRP3P50461 194 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 KPNA2P52292 529 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 PRAMEP78395 509 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 HSD11B2P80365 405 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 ABHD18Q0P651 414 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 BOP1Q14137 746 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 TRIP13Q15645 432 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 TPSAB1Q15661 275 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 LINC00303Q3SY05 128 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHD4-204ENST00000535810 FASTKD1Q53R41 847 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 ARMC6Q6NXE6 501 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 ZNF449Q6P9G9 518 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 NAPRTQ6XQN6 538 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 LDB1Q86U70 411 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 PPP1R3BQ86XI6 285 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 KMT5CQ86Y97 462 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 RASGRP3Q8IV61 690 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 REXO1L1PQ8IX06 675 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 CARFQ8N187 725 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 D2HGDHQ8N465 521 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 ESX1Q8N693 406 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 OR4E2Q8NGC2 313 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 OR52E1Q8NGJ3 308 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 ELMO1Q92556 727 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TFGQ92734 400 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 EXTL1Q92935 676 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 KIAA1143Q96AT1 154 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 MS4A14Q96JA4 679 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 FERD3LQ96RJ6 166 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TTC1Q99614 292 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TRIT1Q9H3H1 467 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 SRMSQ9H3Y6 488 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TFB2MQ9H5Q4 396 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 PDE7BQ9NP56 450 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 CATSPERZQ9NTU4 200 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TRMT1Q9NXH9 659 aaKnown RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 BFARQ9NZS9 450 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 MARCH4Q9P2E8 410 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 IL17BQ9UHF5 180 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 LNPEPQ9UIQ6 1025 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 POMT2Q9UKY4 750 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TTC7AQ9ULT0 858 aaPredicted RBP8.59□□□□□ -1.03
CHD4-204ENST00000535810 BTRCQ9Y297 605 aa8.59□□□□□ -1.03
CHD4-204ENST00000535810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.58□□□□□ -1.04
CHD4-204ENST00000535810 GSAPA4D1B5 854 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 ZNF891A8MT65 544 aaPredicted RBP8.58□□□□□ -1.04
CHD4-204ENST00000535810 AP3B1O00203 1094 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 MATN2O00339 956 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 BTN3A1O00481 513 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 SPAG6O75602 509 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 KIAA0754O94854 1291 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 ZBTB11O95625 1053 aaPredicted RBP8.58□□□□□ -1.04
CHD4-204ENST00000535810 ITGB6P18564 788 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 MGAT1P26572 445 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 ARNTP27540 789 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 ACADLP28330 430 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 NMBRP28336 390 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 MAGEA6P43360 314 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 NPY2RP49146 381 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 ARL4DP49703 201 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 VPS41P49754 854 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 TUBB4BP68371 445 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 CDK16Q00536 496 aa8.58□□□□□ -1.04
CHD4-204ENST00000535810 PLOD1Q02809 727 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms