RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 PCDHGA11Q9Y5H2 935 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 MYH1P12882 1939 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 MYH2Q9UKX2 1941 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 MYH4Q9Y623 1939 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 TUBA3EQ6PEY2 450 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 SATL1Q86VE3 508 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 ZDHHC21Q8IVQ6 265 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 C4orf32Q8N8J7 132 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 LRTOMTQ8WZ04 291 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 PCED1BQ96HM7 432 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 HIST1H2AAQ96QV6 131 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 HNRNPABQ99729 332 aaKnown RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 PAK6Q9NQU5 681 aaPredicted RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 PHF24Q9UPV7 400 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 STXBP5LQ9Y2K9 1186 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 RENP00797 406 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 CST3P01034 146 aaPredicted RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 OR4Q2P0C623 313 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 IL7RP16871 459 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 CLCN7P51798 805 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 ILF3Q12906 894 aaKnown RBP eCLIP9.37□□□□□ -0.91
TNC-210ENST00000535648 RFTN1Q14699 578 aaPredicted RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 FASTKD3Q14CZ7 662 aaKnown RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 FAM110CQ1W6H9 321 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 SLC9B1Q4ZJI4 515 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 UBXN11Q5T124 520 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 VWA5B1Q5TIE3 1220 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 REM2Q8IYK8 340 aaPredicted RBP9.37□□□□□ -0.91
TNC-210ENST00000535648 OR10H4Q8NGA5 316 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 OR2AJ1Q8NGZ0 328 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 DEFB118Q96PH6 123 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
TNC-210ENST00000535648 PIP5K1BO14986 540 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TREHO43280 583 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 HSD17B2P37059 387 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ARCN1P48444 511 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 ATAT1Q5SQI0 421 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TMEM220Q6QAJ8 160 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 RASGEF1AQ8N9B8 481 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TTLQ8NG68 377 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TRPM4Q8TD43 1214 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 JSRP1Q96MG2 331 aaPredicted RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 SLC38A3Q99624 504 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CADM1Q9BY67 442 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 MRPS30Q9NP92 439 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 C1orf109Q9NX04 203 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TESMINQ9Y4I5 508 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ORC5O43913 435 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ALPPP05187 535 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CAP1Q01518 475 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 SLC13A2Q13183 592 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ART5Q96L15 291 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CEP295NLQ96MC4 621 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 SRMSQ9H3Y6 488 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TCF7L1Q9HCS4 588 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 EIF2B4Q9UI10 523 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 PRORSD1PA6NEY8 169 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CPSF4LA6NMK7 179 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 CLDN25C9JDP6 229 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 hCG_2039718K7EN88 272 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 PRAMEF12O95522 483 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 FLT3LGP49771 235 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 RORCP51449 518 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 AKR1D1P51857 326 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CASP9P55211 416 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 CDCA2Q69YH5 1023 aaPredicted RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 ANKRD46Q86W74 232 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 NRSN1Q8IZ57 195 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ATAD1Q8NBU5 361 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ZMIZ2Q8NF64 920 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 SPATA22Q8NHS9 363 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 CCDC115Q96NT0 180 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 THUMPD1Q9NXG2 353 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 CNTN6Q9UQ52 1028 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 MEMO1Q9Y316 297 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 OR4F21O95013 312 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 LINGO3P0C6S8 592 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ALPPL2P10696 532 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 PTPN2P17706 415 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ADAM8P78325 824 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 MAPK14Q16539 360 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 PUS10Q3MIT2 529 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 UBAP2Q5T6F2 1119 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 ZNF613Q6PF04 617 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TMEM126BQ8IUX1 230 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 ERMAPQ96PL5 475 aaPredicted RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 ACSS2Q9NR19 701 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 PABPC4LP0CB38 370 aaKnown RBP9.36□□□□□ -0.91
TNC-210ENST00000535648 RAP2AP10114 183 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ECHS1P30084 290 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 ECT2LQ008S8 904 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 TLR1Q15399 786 aa9.36□□□□□ -0.91
TNC-210ENST00000535648 HSDL1Q3SXM5 330 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms