RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CMAHPQ9Y471 501 aa2.51□□□□□ -2.01
BRCA2-205ENST00000533776 PRRC2AP48634 2157 aaKnown RBP2.5□□□□□ -2.01
BRCA2-205ENST00000533776 SH3BP5O60239 455 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 DOK2O60496 412 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 CLDN1O95832 211 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 ACTN1P12814 892 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 PON1P27169 355 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 GARSP41250 739 aaKnown RBP2.5□□□□□ -2.01
BRCA2-205ENST00000533776 MS4A2Q01362 244 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 LGALS3BPQ08380 585 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 PEX6Q13608 980 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 RAPSNQ13702 412 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 TEAD2Q15562 447 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 DLG2Q15700 870 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 GLIPR1L2Q4G1C9 344 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 DCAF10Q5QP82 559 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 ZDHHC20Q5W0Z9 365 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 GPRIN3Q6ZVF9 776 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 LRRTM1Q86UE6 522 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 GALNT13Q8IUC8 556 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 HACE1Q8IYU2 909 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 SCYL3Q8IZE3 742 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 HPSE2Q8WWQ2 592 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 MYADMQ96S97 322 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 DDOQ99489 341 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 BARD1Q99728 777 aaKnown RBP2.5□□□□□ -2.01
BRCA2-205ENST00000533776 GPATCH1Q9BRR8 931 aaKnown RBP2.5□□□□□ -2.01
BRCA2-205ENST00000533776 TRAF4Q9BUZ4 470 aaPredicted RBP2.5□□□□□ -2.01
BRCA2-205ENST00000533776 LRRC61Q9BV99 259 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 SMARCAD1Q9H4L7 1026 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 DNAJC18Q9H819 358 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 FLRT3Q9NZU0 649 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 TSPYL4Q9UJ04 414 aa2.5□□□□□ -2.01
BRCA2-205ENST00000533776 ITIH6Q6UXX5 1313 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 TMEM8BA6NDV4 472 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ATP6V0E1O15342 81 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 TMCC2O75069 709 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ZBED4O75132 1171 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 HNF4AP41235 474 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 MAGEA11P43364 429 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 RXRGP48443 463 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 COX10Q12887 443 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 DRP2Q13474 957 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 E2F5Q15329 346 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 TAF1BQ53T94 588 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 RARS2Q5T160 578 aaKnown RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 PSRC1Q6PGN9 363 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 C4orf50Q6ZRC1 276 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 TPRG1Q6ZUI0 275 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ZNF554Q86TJ5 538 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ARID3BQ8IVW6 561 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ADGRF2Q8IZF7 708 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 OR1J1Q8NGS3 322 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 OR2L2Q8NH16 312 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 OR4C3Q8NH37 302 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ZFAND2BQ8WV99 257 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 MOAP1Q96BY2 351 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 PGAM5Q96HS1 289 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ZNF582Q96NG8 517 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 HGH1Q9BTY7 390 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 UPF3AQ9H1J1 476 aaKnown RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 SLA2Q9H6Q3 261 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 BLOC1S4Q9NUP1 217 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 TAB2Q9NYJ8 693 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 PNMA2Q9UL42 364 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 ZNF215Q9UL58 517 aaPredicted RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 LAS1LQ9Y4W2 734 aaKnown RBP2.49□□□□□ -2.01
BRCA2-205ENST00000533776 PCDHGA5Q9Y5G8 931 aa2.49□□□□□ -2.01
BRCA2-205ENST00000533776 FSD2A1L4K1 749 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 A8MU10 97 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 VILLO15195 856 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 RSL1D1O76021 490 aaKnown RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 GH2P01242 217 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 UGT1A4P22310 534 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 NMBRP28336 390 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 KCNC3Q14003 757 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 SIM2Q14190 667 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 IRF3Q14653 427 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 NECTIN1Q15223 517 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 ZNF343Q6P1L6 599 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 Q8N377 158 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 OLIG1Q8TAK6 271 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 DAZLQ92904 295 aaKnown RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 SAT2Q96F10 170 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 TIGD1Q96MW7 591 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 SDF4Q9BRK5 362 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 C1QTNF1Q9BXJ1 281 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 DGCR6LQ9BY27 220 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 HRH4Q9H3N8 390 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 HAUS2Q9NVX0 235 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 TRMT1Q9NXH9 659 aaKnown RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 ERAP1Q9NZ08 941 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 RIPK3Q9Y572 518 aa2.48□□□□□ -2.01
BRCA2-205ENST00000533776 SPIN1Q9Y657 262 aaPredicted RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.48□□□□□ -2.01
BRCA2-205ENST00000533776 A0A1W2PR77 199 aa2.47□□□□□ -2.01
BRCA2-205ENST00000533776 A0A1W2PRB8 838 aa2.47□□□□□ -2.01
BRCA2-205ENST00000533776 MEX3AA1L020 520 aaKnown RBP2.47□□□□□ -2.01
BRCA2-205ENST00000533776 A6NCN8 305 aa2.47□□□□□ -2.01
BRCA2-205ENST00000533776 ZNF195O14628 629 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms