RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 CYP20A1Q6UW02 462 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 SFTPA1Q8IWL2 248 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 ASZ1Q8WWH4 475 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 GLYATL1Q969I3 302 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 AP2M1Q96CW1 435 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 VPS35Q96QK1 796 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 P2RY13Q9BPV8 354 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 FAM83CQ9BQN1 747 aa27.83■■■□□ 2.05
SAMD1-202ENST00000533683 TMEM202A6NGA9 273 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 SLC16A5O15375 505 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 SPINT1O43278 529 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 WDR47O94967 919 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 RHDQ02161 417 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 PRKG2Q13237 762 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 CYP2R1Q6VVX0 501 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 ZFAND4Q86XD8 727 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 TCAIMQ8N3R3 496 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 LRGUKQ96M69 825 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 LEF1Q9UJU2 399 aaPredicted RBP27.82■■■□□ 2.04
SAMD1-202ENST00000533683 ZNF490Q9ULM2 529 aaPredicted RBP27.82■■■□□ 2.04
SAMD1-202ENST00000533683 POLR3HQ9Y535 204 aaPredicted RBP27.82■■■□□ 2.04
SAMD1-202ENST00000533683 MANBAO00462 879 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 RGS14O43566 566 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 CLDN9O95484 217 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 AQP4P55087 323 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 KCNC3Q14003 757 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 HNRNPA1L2Q32P51 320 aaKnown RBP27.82■■■□□ 2.04
SAMD1-202ENST00000533683 GRAMD1BQ3KR37 738 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 LDLRAP1Q5SW96 308 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 NEK10Q6ZWH5 1172 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 LRRC70Q7Z2Q7 622 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 TRIM46Q7Z4K8 759 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 PLCD3Q8N3E9 789 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 RASGEF1AQ8N9B8 481 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 PKP2Q99959 881 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 ZNHIT2Q9UHR6 403 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 PCDHA9Q9Y5H5 950 aa27.82■■■□□ 2.04
SAMD1-202ENST00000533683 KRT87PA6NCN2 255 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 SLC28A1O00337 649 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 WNT9AO14904 365 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 ANKRD28O15084 1053 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 SLCO2B1O94956 709 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 SLC2A4P14672 509 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 HNMTP50135 292 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 CTSCP53634 463 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 SGO1Q5FBB7 561 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 RAVER1Q8IY67 606 aaKnown RBP27.81■■■□□ 2.04
SAMD1-202ENST00000533683 ACTR8Q9H981 624 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 FAM8A1Q9UBU6 413 aa27.81■■■□□ 2.04
SAMD1-202ENST00000533683 TCRBV3S1A0A5B6 114 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 CYP2A7P20853 494 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 PBX2P40425 430 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 SLC6A12P48065 614 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 RPL38P63173 70 aaKnown RBP27.8■■■□□ 2.04
SAMD1-202ENST00000533683 HMGCS1Q01581 520 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 PTCHD3Q3KNS1 767 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 RARS2Q5T160 578 aaKnown RBP27.8■■■□□ 2.04
SAMD1-202ENST00000533683 GET4Q7L5D6 327 aaPredicted RBP27.8■■■□□ 2.04
SAMD1-202ENST00000533683 DHFR2Q86XF0 187 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 TMEM126BQ8IUX1 230 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 NRSN1Q8IZ57 195 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 USP7Q93009 1102 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 SLC29A3Q9BZD2 475 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 TRIM8Q9BZR9 551 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 SLAMF8Q9P0V8 285 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 RNASEH2AO75792 299 aaKnown RBP27.8■■■□□ 2.04
SAMD1-202ENST00000533683 HSD17B1P14061 328 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 NAIF1Q69YI7 327 aaPredicted RBP27.8■■■□□ 2.04
SAMD1-202ENST00000533683 RASGRP3Q8IV61 690 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 DNAJB14Q8TBM8 379 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 PIP4K2CQ8TBX8 421 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 MCOLN3Q8TDD5 553 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 ARRDC3Q96B67 414 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 PYCR2Q96C36 320 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 COQ10AQ96MF6 247 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 HPS4Q9NQG7 708 aa27.8■■■□□ 2.04
SAMD1-202ENST00000533683 EDDM13A0A1B0GTR0 161 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 PABPN1LA6NDY0 278 aaKnown RBP27.79■■■□□ 2.04
SAMD1-202ENST00000533683 PSMD11O00231 422 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 LIN7AO14910 233 aaPredicted RBP27.79■■■□□ 2.04
SAMD1-202ENST00000533683 TSPAN6O43657 245 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 ITGB7P26010 798 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 SHHQ15465 462 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 CPSF6Q16630 551 aaKnown RBP eCLIP27.79■■■□□ 2.042e-6■□□□□ 10.1
SAMD1-202ENST00000533683 TMIEQ8NEW7 156 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 TMEM125Q96AQ2 219 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 COQ6Q9Y2Z9 468 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 AP4S1Q9Y587 144 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 MUC22E2RYF6 1773 aaPredicted RBP27.79■■■□□ 2.04
SAMD1-202ENST00000533683 QSOX1O00391 747 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 INPP4BO15327 924 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 RSL1D1O76021 490 aaKnown RBP27.79■■■□□ 2.04
SAMD1-202ENST00000533683 CASP2P42575 452 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 AP1S2P56377 157 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 TMEM115Q12893 351 aaPredicted RBP27.79■■■□□ 2.04
SAMD1-202ENST00000533683 AAK1Q2M2I8 961 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 NEK5Q6P3R8 708 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 RGL4Q8IZJ4 473 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 NUDT8Q8WV74 236 aa27.79■■■□□ 2.04
SAMD1-202ENST00000533683 OR8D1Q8WZ84 308 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms