RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZNF501Q96CX3 271 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 GPR87Q9BY21 358 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 XKR8Q9H6D3 395 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 SYTL2Q9HCH5 934 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 CASS4Q9NQ75 786 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 ZNF71Q9NQZ8 489 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-211ENST00000533492 SLC2A6Q9UGQ3 507 aa14.99□□□□□ -0.01
CPSF1-211ENST00000533492 NRDCO43847 1150 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 WISP1O95388 367 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 RECKO95980 971 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 ZSCAN5DPP0CG00 497 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 RPL22P35268 128 aaKnown RBP14.98□□□□□ -0.01
CPSF1-211ENST00000533492 C4orf22Q6V702 233 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 NAPRTQ6XQN6 538 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 TBC1D21Q8IYX1 336 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 GLIS1Q8NBF1 620 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 OR5AR1Q8NGP9 310 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 SEC14L1Q92503 715 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 CPT1BQ92523 772 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 CLIP3Q96DZ5 547 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 ABHD17AQ96GS6 310 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 NRTNQ99748 197 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 TSSK1BQ9BXA7 367 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 TRIM4Q9C037 500 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 SLC7A5P2Q9GIP4 190 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 ACTL8Q9H568 366 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 AKIRIN1Q9H9L7 192 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-211ENST00000533492 LATS2Q9NRM7 1088 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 ACTR10Q9NZ32 417 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 POLG2Q9UHN1 485 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 SERTAD3Q9UJW9 196 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 DRG1Q9Y295 367 aaKnown RBP14.98□□□□□ -0.01
CPSF1-211ENST00000533492 TDRKHQ9Y2W6 561 aaKnown RBP14.98□□□□□ -0.01
CPSF1-211ENST00000533492 TCAF1Q9Y4C2 921 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 KCNMB2Q9Y691 235 aa14.98□□□□□ -0.01
CPSF1-211ENST00000533492 TMEM150CB9EJG8 249 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 KDM1AO60341 852 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 OR1I1O60431 355 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 FGGP02679 453 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 FURINP09958 794 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 ST6GAL1P15907 406 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 PTPN4P29074 926 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 SHMT2P34897 504 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 CSE1LP55060 971 aaKnown RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 SESN2P58004 480 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 BASP1P80723 227 aaKnown RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 ACVR1Q04771 509 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 AARS2Q5JTZ9 985 aaKnown RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 PCID2Q5JVF3 399 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 DRICH1Q6PGQ1 229 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 ZNF662Q6ZS27 426 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 ADGRF3Q8IZF5 1079 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 TRIM58Q8NG06 486 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 N4BP2L2Q92802 583 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 PEX13Q92968 403 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 ZNF778Q96MU6 729 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 TRAPPC9Q96Q05 1148 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 KLHL25Q9H0H3 589 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 CLMPQ9H6B4 373 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 FARSAQ9Y285 508 aaKnown RBP14.97□□□□□ -0.01
CPSF1-211ENST00000533492 ZKSCAN5Q9Y2L8 839 aa14.97□□□□□ -0.01
CPSF1-211ENST00000533492 SPTBP11277 2137 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 SLC5A10A0PJK1 596 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 MKRN2OSH3BPM6 223 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 AP3B1O00203 1094 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 MEN1O00255 615 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 CEP104O60308 925 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 PVRP15151 417 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 CYP2A7P20853 494 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 ACADLP28330 430 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 CSRP3P50461 194 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 GPS2Q13227 327 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 SIX1Q15475 284 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-211ENST00000533492 LACTB2Q53H82 288 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-211ENST00000533492 PRAMEF17Q5VTA0 474 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 UNC5AQ6ZN44 842 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 SYVN1Q86TM6 617 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 LRRC8AQ8IWT6 810 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 OR5K2Q8NHB8 316 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 SGSM3Q96HU1 749 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 LRFN5Q96NI6 719 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 RUFY1Q96T51 708 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 PITPNM3Q9BZ71 974 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 CHRAC1Q9NRG0 131 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 BFARQ9NZS9 450 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 ICKQ9UPZ9 632 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 MAN2B2Q9Y2E5 1009 aa14.96□□□□□ -0.01
CPSF1-211ENST00000533492 BHMG1C9JSJ3 638 aaPredicted RBP14.95□□□□□ -0.02
CPSF1-211ENST00000533492 MSL3P1P0C860 447 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 KCNJ1P48048 391 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 NPY2RP49146 381 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 RPS18P62269 152 aaKnown RBP14.95□□□□□ -0.02
CPSF1-211ENST00000533492 HSPA14Q0VDF9 509 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 PLEKHS1Q5SXH7 462 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 SPESP1Q6UW49 350 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 ZNF534Q76KX8 674 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 TMEM135Q86UB9 458 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 GPR135Q8IZ08 494 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 SLC38A9Q8NBW4 561 aa14.95□□□□□ -0.02
CPSF1-211ENST00000533492 OR1L3Q8NH93 324 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms