RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GABARAPL1Q9H0R8 117 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 CLMPQ9H6B4 373 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 IPPKQ9H8X2 491 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 SLC27A5Q9Y2P5 690 aa16.31■□□□□ 0.2
CTSB-228ENST00000533455 RAD51BO15315 384 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 STX7O15400 261 aaKnown RBP16.3■□□□□ 0.2
CTSB-228ENST00000533455 FFAR2O15552 330 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 JRKO75564 520 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 CREG1O75629 220 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 WDR47O94967 919 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 F11P03951 625 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 THPOP40225 353 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 HALP42357 657 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
CTSB-228ENST00000533455 DSC1Q08554 894 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 CDK5R2Q13319 367 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 BTLAQ7Z6A9 289 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 SLCO6A1Q86UG4 719 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 ARL10Q8N8L6 244 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 GPR152Q8TDT2 470 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 TBC1D20Q96BZ9 403 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 EXOC2Q96KP1 924 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 DPY30Q9C005 99 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 SARS2Q9NP81 518 aaKnown RBP16.3■□□□□ 0.2
CTSB-228ENST00000533455 NECTIN3Q9NQS3 549 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 PCDHB1Q9Y5F3 818 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 ORC6Q9Y5N6 252 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 RAI2Q9Y5P3 530 aa16.3■□□□□ 0.2
CTSB-228ENST00000533455 H3BNC9 293 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 BCKDKO14874 412 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 AXIN1O15169 862 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 PGRP06401 933 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 ALOX5P09917 674 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 JUNDP17535 347 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 NR4A1P22736 598 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 SLC6A4P31645 630 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 GZMMP51124 257 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 CDH4P55283 916 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 EMX1Q04741 257 aaPredicted RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 SPANXN4Q5MJ08 99 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 SETD9Q8NE22 299 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 FRS2Q8WU20 508 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 YIPF6Q96EC8 236 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 REXO5Q96IC2 774 aaKnown RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 KAT8Q9H7Z6 458 aaKnown RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 FBXO8Q9NRD0 319 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 INTS6Q9UL03 887 aaKnown RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 INVSQ9Y283 1065 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 SH3BP1Q9Y3L3 701 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 ANKRD66B4E2M5 251 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 TAPBPO15533 448 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 E2F6O75461 281 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 RECQL5O94762 991 aaPredicted RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 ZDHHC11BP0C7U3 371 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 TRIM46Q7Z4K8 759 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 ZNF280BQ86YH2 543 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 MFSD4AQ8N468 514 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 LIX1Q8N485 282 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 ATAD1Q8NBU5 361 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 OR7A2PQ8NGA2 310 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 CPPED1Q9BRF8 314 aaPredicted RBP16.29■□□□□ 0.2
CTSB-228ENST00000533455 TBCDQ9BTW9 1192 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 ADGRE3Q9BY15 652 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 BPIFA1Q9NP55 256 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 ITGB1BP2Q9UKP3 347 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 HSPE1-MOB4S4R3N1 261 aa16.29■□□□□ 0.2
CTSB-228ENST00000533455 IQCF5A8MTL0 148 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 PTGES3LE9PB15 166 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 PRMT5O14744 637 aaPredicted RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 ACSL4O60488 711 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 PRKACGP22612 351 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 MAGEA2P43356 314 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 RXRGP48443 463 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 CACNG1Q06432 222 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 LRIF1Q5T3J3 769 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 CACHD1Q5VU97 1274 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 SHQ1Q6PI26 577 aaKnown RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 TAS2R42Q7RTR8 314 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 SPON2Q9BUD6 331 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 DUSP21Q9H596 190 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 CCSER2Q9H7U1 834 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 C1orf109Q9NX04 203 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ELOVL2Q9NXB9 296 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ERVW-1Q9UQF0 538 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 MAN2B2Q9Y2E5 1009 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 OARD1Q9Y530 152 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 PCDHGC4Q9Y5F7 938 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ZFP37Q9Y6Q3 630 aaPredicted RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 SYN3O14994 580 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 ERN1O75460 977 aaKnown RBP16.28■□□□□ 0.2
CTSB-228ENST00000533455 ANGPTL1O95841 491 aa16.28■□□□□ 0.2
CTSB-228ENST00000533455 SERPINA1P01009 418 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms