RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ENTPD4Q9Y227 616 aa12.6□□□□□ -0.39
COPB1-209ENST00000533096 AP1M2Q9Y6Q5 423 aa12.6□□□□□ -0.39
COPB1-209ENST00000533096 SPTBN1Q01082 2364 aaKnown RBP12.6□□□□□ -0.39
COPB1-209ENST00000533096 A0A1W2PQJ5 194 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 CCDC78A2IDD5 438 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 CCL22O00626 93 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 SGTAO43765 313 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 CST8O60676 142 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 CNOT3O75175 753 aaKnown RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 UMODP07911 640 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 PECAM1P16284 738 aaPredicted RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 UBASH3AP57075 661 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 FANCCQ00597 558 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 BRD3Q15059 726 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 PRKD1Q15139 912 aaPredicted RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 BCL7AQ4VC05 210 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 SARM1Q6SZW1 724 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 LINC00696Q6ZRV3 163 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 SHISA6Q6ZSJ9 500 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 MICALCLQ6ZW33 695 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 BZW1Q7L1Q6 419 aaKnown RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 ADGRF3Q8IZF5 1079 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 CATSPER1Q8NEC5 780 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 OR2Y1Q8NGV0 311 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 TFGQ92734 400 aaPredicted RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 FCRL5Q96RD9 977 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 NDC1Q9BTX1 674 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 PITPNM3Q9BZ71 974 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 COPG2Q9UBF2 871 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 RSPH14Q9UHP6 348 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
COPB1-209ENST00000533096 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 TDRKHQ9Y2W6 561 aaKnown RBP12.59□□□□□ -0.39
COPB1-209ENST00000533096 KLHL33A6NCF5 533 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 CD63P08962 238 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 PYGMP11217 842 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 ATP1B2P14415 290 aaPredicted RBP12.58□□□□□ -0.4
COPB1-209ENST00000533096 NR2C2P49116 596 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 CDKN1CP49918 316 aaPredicted RBP12.58□□□□□ -0.4
COPB1-209ENST00000533096 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
COPB1-209ENST00000533096 OLIG2Q13516 323 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 ZIC1Q15915 447 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 NKAIN1Q4KMZ8 207 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 AGAP7PQ5VUJ5 663 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 UNC5AQ6ZN44 842 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 TAS2R42Q7RTR8 314 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 HM13Q8TCT9 377 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 FAR1Q8WVX9 515 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 P3H4Q92791 437 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 LINC00615Q96LM1 132 aaPredicted RBP12.58□□□□□ -0.4
COPB1-209ENST00000533096 MAGEB10Q96LZ2 347 aaPredicted RBP12.58□□□□□ -0.4
COPB1-209ENST00000533096 AGAP4Q96P64 663 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 GBP4Q96PP9 640 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 COPS8Q99627 209 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 WDR77Q9BQA1 342 aaPredicted RBP12.58□□□□□ -0.4
COPB1-209ENST00000533096 MVB12BQ9H7P6 319 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 COG4Q9H9E3 785 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 SMOXQ9NWM0 555 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 FBXL4Q9UKA2 621 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 KLHL20Q9Y2M5 609 aa12.58□□□□□ -0.4
COPB1-209ENST00000533096 ISM1B1AKI9 464 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 CFAP99D6REC4 459 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 AGPSO00116 658 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 UGT2B7P16662 529 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 GRNP28799 593 aaKnown RBP12.57□□□□□ -0.4
COPB1-209ENST00000533096 ARHGAP25P42331 645 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 SRSF11Q05519 484 aaKnown RBP12.57□□□□□ -0.4
COPB1-209ENST00000533096 MPP3Q13368 585 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 TFDP2Q14188 446 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 TAF1AQ15573 450 aaPredicted RBP12.57□□□□□ -0.4
COPB1-209ENST00000533096 RHBDD2Q6NTF9 364 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 SPESP1Q6UW49 350 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 CLEC17AQ6ZS10 378 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 CCDC50Q8IVM0 306 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 CLDN19Q8N6F1 224 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 C19orf47Q8N9M1 422 aaKnown RBP12.57□□□□□ -0.4
COPB1-209ENST00000533096 OR13C4Q8NGS5 318 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.57□□□□□ -0.4
COPB1-209ENST00000533096 OR52A5Q9H2C5 316 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 SLC6A20Q9NP91 592 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 DDX56Q9NY93 547 aaKnown RBP12.57□□□□□ -0.4
COPB1-209ENST00000533096 SPHK1Q9NYA1 384 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 PLAGL1Q9UM63 463 aa12.57□□□□□ -0.4
COPB1-209ENST00000533096 RP1L1Q8IWN7 2480 aaPredicted RBP12.57□□□□□ -0.4
COPB1-209ENST00000533096 A0A1B0GUH1 482 aa12.56□□□□□ -0.4
COPB1-209ENST00000533096 H7C0C1 242 aa12.56□□□□□ -0.4
COPB1-209ENST00000533096 ZSCAN9O15535 394 aaPredicted RBP12.56□□□□□ -0.4
COPB1-209ENST00000533096 AKR1B10O60218 316 aa12.56□□□□□ -0.4
COPB1-209ENST00000533096 TMEM253P0C7T8 217 aa12.56□□□□□ -0.4
COPB1-209ENST00000533096 PRSS56P0CW18 603 aa12.56□□□□□ -0.4
COPB1-209ENST00000533096 EDN3P14138 238 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms