RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 PURAQ00577 322 aaKnown RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 DPY19L1Q2PZI1 675 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PLA2G4EQ3MJ16 856 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ZNF404Q494X3 552 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PRAMEF19Q5SWL8 479 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PIK3R6Q5UE93 754 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 SYT12Q8IV01 421 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 SPPL2AQ8TCT8 520 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 EEF1AKMT1Q8WVE0 214 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 TPD52L3Q96J77 140 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ITPAQ9BY32 194 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 SLC29A3Q9BZD2 475 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ARL15Q9NXU5 204 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 LRFN2Q9ULH4 789 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 H7C4K7 107 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 STK16O75716 305 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 SULT1C4O75897 302 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 CLDN9O95484 217 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ATP5C1P36542 298 aaKnown RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 KCNC1P48547 511 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 MRPL19P49406 292 aaKnown RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 UPP1Q16831 310 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 FAM110CQ1W6H9 321 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ZNF181Q2M3W8 571 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ZC3H12BQ5HYM0 836 aaKnown RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 SDHAF4Q5VUM1 108 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 KIAA0319Q5VV43 1072 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 TMC5Q6UXY8 1006 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 EXOC2Q96KP1 924 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PANX1Q96RD7 426 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 TRIT1Q9H3H1 467 aaKnown RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 ASB8Q9H765 288 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 RMI1Q9H9A7 625 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PNMA8BQ9ULN7 279 aaPredicted RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 CAB39Q9Y376 341 aaPredicted RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 MCM3APO60318 1980 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 LOC110117498-PIK3R3F6TDL0 507 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 RGS5O15539 181 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 MFN2O95140 757 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 HSMCR30P0CW71 290 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 AKR1A1P14550 325 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PTX3P26022 381 aaPredicted RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 DCTP40126 519 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 CDH4P55283 916 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 CXCR4P61073 352 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ABRQ12979 859 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 LAPTM5Q13571 262 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PTPRCAPQ14761 206 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ALFQ53S48 1182 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 MANEALQ5VSG8 457 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 NANOGNBQ7Z5D8 188 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 PROKR1Q8TCW9 393 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 UTP15Q8TED0 518 aaKnown RBP9.23□□□□□ -0.93
BDNF-216ENST00000532997 PIK3R3Q92569 461 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 C8orf48Q96LL4 319 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ALPK1Q96QP1 1244 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 COPS4Q9BT78 406 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 BBS2Q9BXC9 721 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 TUBB1Q9H4B7 451 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 RETREG1Q9H6L5 497 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 ERVW-1Q9UQF0 538 aa9.23□□□□□ -0.93
BDNF-216ENST00000532997 OR6C75A6NL08 312 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 TAF4O00268 1085 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 XYLBO75191 536 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 INMTO95050 263 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 RPLP0P05388 317 aaKnown RBP9.22□□□□□ -0.93
BDNF-216ENST00000532997 ITGAMP11215 1152 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 HOXD8P13378 290 aaPredicted RBP9.22□□□□□ -0.93
BDNF-216ENST00000532997 COX7A2P14406 83 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 CYP2A7P20853 494 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 CD247P20963 164 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 HRH2P25021 359 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 SPCS2Q15005 226 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 CPSF6Q16630 551 aaKnown RBP eCLIP9.22□□□□□ -0.93
BDNF-216ENST00000532997 FBXO43Q4G163 708 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 SPANXN4Q5MJ08 99 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 MFSD14CQ5VZR4 134 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 TMEM207Q6UWW9 146 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 CSGALNACT1Q8TDX6 532 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 HEPHQ9BQS7 1158 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 KCNH6Q9H252 994 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 SP140LQ9H930 580 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 RASSF1Q9NS23 344 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 POLR3BQ9NW08 1133 aaPredicted RBP9.22□□□□□ -0.93
BDNF-216ENST00000532997 WBP11Q9Y2W2 641 aaKnown RBP9.22□□□□□ -0.93
BDNF-216ENST00000532997 COL4A5P29400 1685 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 M0QX08 132 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 TBX1O43435 398 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 XPNPEP2O43895 674 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 TLR5O60602 858 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 TSPAN3O60637 253 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 CCNKO75909 580 aa9.22□□□□□ -0.93
BDNF-216ENST00000532997 DDX5P17844 614 aaKnown RBP9.22□□□□□ -0.93
BDNF-216ENST00000532997 ACVRL1P37023 503 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms