RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 CLDN2P57739 230 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 BTN3A2P78410 334 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 ZNF33AQ06730 810 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 OTUD3Q5T2D3 398 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 WLSQ5T9L3 541 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 KLHDC10Q6PID8 442 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 ZYG11AQ6WRX3 759 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 TMEM26Q6ZUK4 368 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 ADGRD2Q7Z7M1 963 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 TSPAN33Q86UF1 283 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 ZDHHC12Q96GR4 267 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 TSGA13Q96PP4 275 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 UHRF1Q96T88 793 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 SPATA5L1Q9BVQ7 753 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 CCDC134Q9H6E4 229 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 NLE1Q9NVX2 485 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 C15orf38-AP3S2A0A0A6YYH1 394 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 OR6C74A6NCV1 312 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 SNTNA6NMZ2 147 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 GSNP06396 782 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 DCNP07585 359 aaKnown RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 HNRNPA2B1P22626 353 aaKnown RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 IL12BP29460 328 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 RBMS1P29558 406 aaKnown RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 UBAP2LQ14157 1087 aaKnown RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 IL23RQ5VWK5 629 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 ARPINQ7Z6K5 226 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 TRAM1L1Q8N609 369 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 NPWQ8N729 165 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 CAMKVQ8NCB2 501 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 CKAP2Q8WWK9 683 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 HCN2Q9UL51 889 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 K7EPI3 171 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 DUX1O43812 170 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 B4GALT2O60909 372 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 CBX6O95503 412 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 GRIA3P42263 894 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 SLC10A2Q12908 348 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 Q7L0L9 218 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 IMP4Q96G21 291 aaKnown RBP7.81□□□□□ -1.16
CTNND1-230ENST00000532245 SLC22A12Q96S37 553 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 PRRG3Q9BZD7 231 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 RETREG1Q9H6L5 497 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 SLCO1B3Q9NPD5 702 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 PACSIN3Q9UKS6 424 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 SCML1Q9UN30 329 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 MAP4K5Q9Y4K4 846 aa7.81□□□□□ -1.16
CTNND1-230ENST00000532245 CXCL10P02778 98 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 RPL4P36578 427 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 RABIFP47224 123 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 DPYSQ14117 519 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SLC9A5Q14940 896 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 HNRNPA1L2Q32P51 320 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 RBM20Q5T481 1227 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ADGRD1Q6QNK2 874 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 DEF8Q6ZN54 512 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ROGDIQ9GZN7 287 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 PCDHGB3Q9Y5G1 929 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SIPA1L3O60292 1781 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 AQP1P29972 269 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CASRP41180 1078 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 KIR3DL1P43629 444 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 RAB8AP61006 207 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SCAPQ12770 1279 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 TAF13Q15543 124 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 DEFB133Q30KQ1 61 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 DCUN1D3Q8IWE4 304 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 GJD3Q8N144 294 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ZSCAN1Q8NBB4 408 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 MRGPRX2Q96LB1 330 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 TDRD1Q9BXT4 1180 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 MYLK2Q9H1R3 596 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 BLOC1S6Q9UL45 172 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ACSL5Q9ULC5 683 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CORO2BQ9UQ03 480 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 BCORQ6W2J9 1755 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 AP3D1O14617 1153 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 UBXN7O94888 489 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 PIM1P11309 404 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 RYKP34925 604 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 IFNGR2P38484 337 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 GDF5P43026 501 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ASMTP46597 345 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 KCNJ11Q14654 390 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CYP1B1Q16678 543 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ARL13AQ5H913 290 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 Q6ZSR6 202 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CYP4Z2PQ8N1L4 340 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SMPDL3BQ92485 455 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 HSFX1Q9UBD0 423 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CNTN6Q9UQ52 1028 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 MYH11P35749 1972 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 A0A0U1RQS6 177 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 C9JVG2 144 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 CDC7O00311 574 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 KHNYNO15037 678 aaKnown RBP7.8□□□□□ -1.16
CTNND1-230ENST00000532245 ECI2O75521 394 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 SASH3O75995 380 aa7.8□□□□□ -1.16
CTNND1-230ENST00000532245 PRAMEF12O95522 483 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms