RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TPBGLP0DKB5 382 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 CHRM3P20309 590 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 SLC5A2P31639 672 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 MAPK10P53779 464 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 PPP1CAP62136 330 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 ABRQ12979 859 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 FRG1Q14331 258 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 CACHD1Q5VU97 1274 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 IRGCQ6NXR0 463 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 ZNF549Q6P9A3 640 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 FAM92BQ6ZTR7 304 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 PRSS42Q7Z5A4 293 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 CNTN4Q8IWV2 1026 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 BMPERQ8N8U9 685 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 C2CD4AQ8NCU7 369 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 OR52E1Q8NGJ3 308 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 KIF18AQ8NI77 898 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 GABPB2Q8TAK5 448 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 KLHL6Q8WZ60 621 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 USP7Q93009 1102 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 ART4Q93070 314 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 CERS2Q96G23 380 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 CFAP36Q96G28 342 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 TAAR9Q96RI9 348 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 NRTNQ99748 197 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 LRRC1Q9BTT6 524 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 HGH1Q9BTY7 390 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 SRMSQ9H3Y6 488 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 ZNF768Q9H5H4 540 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 GALPQ9UBC7 116 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 MRFAP1Q9Y605 127 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 COMMD10Q9Y6G5 202 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 A0A087WV48 116 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 C9orf172C9J069 976 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 BTN3A3O00478 584 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 EIF3HO15372 352 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 RASSF9O75901 435 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 POLR2CP19387 275 aaPredicted RBP12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 GABRB3P28472 473 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 CARSP49589 748 aaKnown RBP12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 SEPHS1P49903 392 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 CLCN7P51798 805 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 PCBP4P57723 403 aaKnown RBP12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 MPP1Q00013 466 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 MC2RQ01718 297 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 CAV1Q03135 178 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 GBX1Q14549 363 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 FASTKD3Q14CZ7 662 aaKnown RBP12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 TRADDQ15628 312 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 TMEM164Q5U3C3 297 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 ARMC6Q6NXE6 501 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 CNSTQ6PJW8 725 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 UNC5DQ6UXZ4 953 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 KIAA0408Q6ZU52 694 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 AMIGO1Q86WK6 493 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 FAM129CQ86XR2 697 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 MNS1Q8NEH6 495 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 GSDMBQ8TAX9 411 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 CD180Q99467 661 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 CCDC68Q9H2F9 335 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 XKR8Q9H6D3 395 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 FBXO8Q9NRD0 319 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 SLC39A1Q9NY26 324 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 KLHL42Q9P2K6 505 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 ACSL6Q9UKU0 697 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 MED16Q9Y2X0 877 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 PCDHGA3Q9Y5H0 932 aa12.31□□□□□ -0.44
CCDC90B-216ENST00000529856 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 IGHV5-51A0A0C4DH38 117 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 E5RI56 91 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 BTN3A1O00481 513 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 RRP8O43159 456 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 AHSGP02765 367 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 ATP5DP30049 168 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 SHMT2P34897 504 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 KPNA2P52292 529 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 PLTPP55058 493 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 SLC7A5Q01650 507 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 PRKAA1Q13131 559 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 KYNUQ16719 465 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 DNTTIP2Q5QJE6 756 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 C8orf74Q6P047 294 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 TRMT10BQ6PF06 316 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 GALNT7Q86SF2 657 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 ZBED8Q8IZ13 594 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 ADGRF3Q8IZF5 1079 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 ZBTB2Q8N680 514 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 CFAP61Q8NHU2 1237 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 UBXN4Q92575 508 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 KCNJ9Q92806 393 aa12.3□□□□□ -0.44
CCDC90B-216ENST00000529856 FAM136AQ96C01 138 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms