RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 GCNT3O95395 438 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ATP5BP06576 529 aaKnown RBP4.35□□□□□ -1.71
C11orf88-204ENST00000529661 UMODP07911 640 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 FAM106CPP0CH98 169 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 KRT2P35908 639 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 TCF7P36402 384 aaPredicted RBP4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF132P52740 706 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ISL1P61371 349 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ARL16Q0P5N6 197 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 PNRC1Q12796 327 aaPredicted RBP4.35□□□□□ -1.71
C11orf88-204ENST00000529661 GTF2H2Q13888 395 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 STPG1Q5TH74 334 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 GTF2H2CQ6P1K8 395 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 PET117Q6UWS5 81 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 MFSD6Q6ZSS7 791 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ASB18Q6ZVZ8 466 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 DET1Q7L5Y6 550 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 DGLUCYQ7Z3D6 616 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ODF3L1Q8IXM7 274 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 CEP57L1Q8IYX8 460 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 CCAR2Q8N163 923 aaKnown RBP4.35□□□□□ -1.71
C11orf88-204ENST00000529661 GBGT1Q8N5D6 347 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 IQUBQ8NA54 791 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 SLC4A11Q8NBS3 891 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 PPP4R1Q8TF05 950 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 SLC38A5Q8WUX1 472 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ROBO4Q8WZ75 1007 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 PHF21AQ96BD5 680 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 SPDL1Q96EA4 605 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 JAKMIP1Q96N16 626 aaKnown RBP4.35□□□□□ -1.71
C11orf88-204ENST00000529661 ZNF558Q96NG5 402 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 DPAGT1Q9H3H5 408 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 UBTD1Q9HAC8 227 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 EBF2Q9HAK2 575 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 RASAL2Q9UJF2 1139 aa4.35□□□□□ -1.71
C11orf88-204ENST00000529661 A0A087WV48 116 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 ELOVL7A1L3X0 281 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 CLIC2O15247 247 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 ZNHIT1O43257 154 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 GPR137BO60478 399 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 WDR1O75083 606 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 RAB40ALP0C0E4 278 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 CDC25CP30307 473 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 TLX1P31314 330 aaPredicted RBP4.34□□□□□ -1.71
C11orf88-204ENST00000529661 TNNT3P45378 269 aaPredicted RBP4.34□□□□□ -1.71
C11orf88-204ENST00000529661 SLC9A3P48764 834 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 NAGLUP54802 743 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 POLR2LP62875 67 aaKnown RBP4.34□□□□□ -1.71
C11orf88-204ENST00000529661 TUBB2AQ13885 445 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 MPP7Q5T2T1 576 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 GRTP1Q5TC63 336 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 IRAK1BP1Q5VVH5 260 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 ZBTB49Q6ZSB9 765 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 LMNTD1Q8N9Z9 388 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 TMEM255BQ8WV15 326 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 NR4A3Q92570 626 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 SPSB1Q96BD6 273 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 SEPHS2Q99611 448 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 MGME1Q9BQP7 344 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 BTBD10Q9BSF8 475 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 LMF2Q9BU23 707 aaKnown RBP4.34□□□□□ -1.71
C11orf88-204ENST00000529661 TUBB2BQ9BVA1 445 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 FNDC11Q9BVV2 318 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 CHCHD3Q9NX63 227 aaKnown RBP4.34□□□□□ -1.71
C11orf88-204ENST00000529661 DPP3Q9NY33 737 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 DNAJB9Q9UBS3 223 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 OR2W1Q9Y3N9 320 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 CGNL1Q0VF96 1302 aa4.34□□□□□ -1.71
C11orf88-204ENST00000529661 TRAV34A0A0B4J273 112 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 TEX13DA0A0J9YY54 714 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 CTAGE9A4FU28 777 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 OR6C76A6NM76 312 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 PRR32B1ATL7 298 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 EIF3DO15371 548 aaKnown RBP eCLIP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 TGDSO95455 350 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 IGHV2-70P01814 119 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 ZFYP08048 801 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 CTAGE8P0CG41 777 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 HLA-DOBP13765 273 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 ITGA2P17301 1181 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 CYP11B2P19099 503 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 POLR2CP19387 275 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 PSMA3P25788 255 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 HSPA4P34932 840 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 USP8P40818 1118 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 IL15P40933 162 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 ASCL1P50553 236 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 BMXP51813 675 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 FUT6P51993 359 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 CAPZA1P52907 286 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 RELQ04864 619 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 PRKCZQ05513 592 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 PLA2G7Q13093 441 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 KRT39Q6A163 491 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 KLC3Q6P597 504 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 SHQ1Q6PI26 577 aaKnown RBP4.33□□□□□ -1.72
C11orf88-204ENST00000529661 LINGO4Q6UY18 593 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 GDPD4Q6W3E5 623 aa4.33□□□□□ -1.72
C11orf88-204ENST00000529661 RAD9BQ6WBX8 426 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms