RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CHRNA1P02708 482 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 JUNBP17275 347 aaPredicted RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 OR2B6P58173 313 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 SYT16Q17RD7 645 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 ADPRMQ3LIE5 342 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 FUNDC1Q8IVP5 155 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 ELMOD2Q8IZ81 293 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 PCSK9Q8NBP7 692 aaKnown RBP17.59■□□□□ 0.41
LTBP3-210ENST00000528516 APOLD1Q96LR9 279 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 TTYH2Q9BSA4 534 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 MIOSQ9NXC5 875 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 MAP10Q9P2G4 905 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 PRKAG2Q9UGJ0 569 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 SLCO3A1Q9UIG8 710 aa17.59■□□□□ 0.41
LTBP3-210ENST00000528516 CENPBD1B2RD01 187 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 CDC7O00311 574 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 LZTS3O60299 673 aaPredicted RBP17.58■□□□□ 0.41
LTBP3-210ENST00000528516 MTX2O75431 263 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 CHRM5P08912 532 aaPredicted RBP17.58■□□□□ 0.41
LTBP3-210ENST00000528516 KCNAB2Q13303 367 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 GRB7Q14451 532 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 HECTD3Q5T447 861 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 GTF2IRD2BQ6EKJ0 949 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 GTF2IRD2Q86UP8 949 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 SVOPQ8N4V2 548 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 ZNF540Q8NDQ6 660 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 TRIM63Q969Q1 353 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 MAELQ96JY0 434 aaKnown RBP17.58■□□□□ 0.41
LTBP3-210ENST00000528516 C3orf30Q96M34 536 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 OR52E6Q96RD3 313 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.58■□□□□ 0.41
LTBP3-210ENST00000528516 SPEF1Q9Y4P9 236 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 ACTL7AQ9Y615 435 aa17.58■□□□□ 0.41
LTBP3-210ENST00000528516 SCAMP1O15126 338 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 PGLSO95336 258 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 MED26O95402 600 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 FAM214AQ32MH5 1076 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 ALFQ53S48 1182 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 RPL3LQ92901 407 aaKnown RBP17.58■□□□□ 0.4
LTBP3-210ENST00000528516 YME1L1Q96TA2 773 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 RCOR3Q9P2K3 495 aaPredicted RBP17.58■□□□□ 0.4
LTBP3-210ENST00000528516 WBP11Q9Y2W2 641 aaKnown RBP17.58■□□□□ 0.4
LTBP3-210ENST00000528516 ARIH1Q9Y4X5 557 aaPredicted RBP17.58■□□□□ 0.4
LTBP3-210ENST00000528516 GJA1P17302 382 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 DIO3P55073 304 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 TOP3AQ13472 1001 aaPredicted RBP17.58■□□□□ 0.4
LTBP3-210ENST00000528516 ZNF697Q5TEC3 545 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 DCP2Q8IU60 420 aaKnown RBP17.58■□□□□ 0.4
LTBP3-210ENST00000528516 SYT12Q8IV01 421 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 ITCHQ96J02 903 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 TXNDC15Q96J42 360 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 OR2B2Q9GZK3 357 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 NUAK2Q9H093 628 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 TEKT2Q9UIF3 430 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 BTBD3Q9Y2F9 522 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 RAI2Q9Y5P3 530 aa17.58■□□□□ 0.4
LTBP3-210ENST00000528516 FAM20BO75063 409 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 HAPLN1P10915 354 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 HSD17B1P14061 328 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 FAM110CQ1W6H9 321 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 ZC3H12BQ5HYM0 836 aaKnown RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 FBXL22Q6P050 247 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 OR10A6Q8NH74 314 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 C1QTNF1Q9BXJ1 281 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 PAQR5Q9NXK6 330 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 ERVK-18Q9QC07 812 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 TRPC4Q9UBN4 977 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 VPS4AQ9UN37 437 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 PCDHGA11Q9Y5H2 935 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 SLC25A14O95258 325 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 URODP06132 367 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 ALDOCP09972 364 aaKnown RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 GPC1P35052 558 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 PRKAG1P54619 331 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 AUTS2Q8WXX7 1259 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 PAK1IP1Q9NWT1 392 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 STMN3Q9NZ72 180 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 SARDHQ9UL12 918 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 SIPA1L1O43166 1804 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 IRAK2O43187 625 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 ICMTO60725 284 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 UPK1BO75841 260 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 UMPSP11172 480 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 FSHRP23945 695 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 CCNCP24863 283 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 CHI3L1P36222 383 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 BMPR1AP36894 532 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 TGFBR1P36897 503 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 MCCD1P59942 119 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 VARS2Q5ST30 1063 aaKnown RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 STEAP3Q658P3 488 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 CHDHQ8NE62 594 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 FAM83FQ8NEG4 500 aaPredicted RBP17.57■□□□□ 0.4
LTBP3-210ENST00000528516 DCSTAMPQ9H295 470 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 FAM118AQ9NWS6 357 aa17.57■□□□□ 0.4
LTBP3-210ENST00000528516 EFCAB9A8MZ26 197 aa17.56■□□□□ 0.4
LTBP3-210ENST00000528516 UPK3BL1B0FP48 263 aa17.56■□□□□ 0.4
LTBP3-210ENST00000528516 UPK3BL2E5RIL1 263 aa17.56■□□□□ 0.4
LTBP3-210ENST00000528516 PKMP14618 531 aaKnown RBP17.56■□□□□ 0.4
LTBP3-210ENST00000528516 PRKACBP22694 351 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms