RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MAGEA3P43357 314 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 CSE1LP55060 971 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 PTK6Q13882 451 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 DHX34Q14147 1143 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 MAP7Q14244 749 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 TMED2Q15363 201 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 TYSND1Q2T9J0 566 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 ANKRD20A4Q4UJ75 823 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 DNAJC21Q5F1R6 531 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 RNASEH2BQ5TBB1 312 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 TMEM135Q86UB9 458 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 BPHLQ86WA6 291 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 PPP1R3BQ86XI6 285 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 RASGRP3Q8IV61 690 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 KRT222Q8N1A0 295 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 D2HGDHQ8N465 521 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 ZSCAN1Q8NBB4 408 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 LSM14AQ8ND56 463 aaKnown RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 BBC3Q96PG8 261 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 ULBP3Q9BZM4 244 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 C1GALT1Q9NS00 363 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 ASIC3Q9UHC3 531 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 CDYLQ9Y232 598 aa25.59■■□□□ 1.69
TSPAN4-217ENST00000527644 ERVH48-1M5A8F1 160 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 BTN3A1O00481 513 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 KPNA5O15131 536 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 ATXN7O15265 892 aaPredicted RBP25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 FOLR1P15328 257 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 OGNP20774 298 aaKnown RBP25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 NEPROQ6NW34 567 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 TIPARPQ7Z3E1 657 aaKnown RBP25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 PCGF5Q86SE9 256 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 RUNDC3BQ96NL0 473 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 XKR8Q9H6D3 395 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 RARRES3Q9UL19 164 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 ICKQ9UPZ9 632 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 RPS6KL1Q9Y6S9 549 aa25.58■■□□□ 1.69
TSPAN4-217ENST00000527644 C2orf74A8MZ97 194 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 KDM1AO60341 852 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 SPAG6O75602 509 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 SLCO2B1O94956 709 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 CDH3P22223 829 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 PRDX3P30048 256 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 SHMT2P34897 504 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 ADARP55265 1226 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 EIF3BP55884 814 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 ABHD18Q0P651 414 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 TUBB3Q13509 450 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 KCNAB1Q14722 419 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 TMTC4Q5T4D3 741 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 VRK3Q8IV63 474 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 ADGRF3Q8IZF5 1079 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 ESX1Q8N693 406 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 LPGAT1Q92604 370 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 ZNF669Q96BR6 464 aaPredicted RBP25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 ELMO2Q96JJ3 720 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 SIGLEC10Q96LC7 697 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 BIRC8Q96P09 236 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 FCRL4Q96PJ5 515 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 NRTNQ99748 197 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 TRIM56Q9BRZ2 755 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 BTRCQ9Y297 605 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 TDRKHQ9Y2W6 561 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 PCDHGA4Q9Y5G9 962 aa25.57■■□□□ 1.68
TSPAN4-217ENST00000527644 H3BMM5 538 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 DNALI1O14645 258 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 RPN2P04844 631 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 EBLN1P0CF75 366 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 PAFAH1B1P43034 410 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 PTGIRP43119 386 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 KIAA1614Q5VZ46 1190 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 SYDE1Q6ZW31 735 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 CILP2Q8IUL8 1156 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 WBP1Q96G27 269 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 PPM1MQ96MI6 270 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 FGF21Q9NSA1 209 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 OR6C2Q9NZP2 312 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 RNF14Q9UBS8 474 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 VPS9D1Q9Y2B5 631 aa25.56■■□□□ 1.68
TSPAN4-217ENST00000527644 ZCWPW2A0A1B0GU75 182 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 TK2O00142 265 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 USP1O94782 785 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 ESR1P03372 595 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 LIFP15018 202 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 ZNF28P17035 718 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 WT1P19544 449 aaPredicted RBP25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 FMO4P31512 558 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 TUBB4BP68371 445 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 THOC5Q13769 683 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 TUBB2AQ13885 445 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 CTSL3PQ5NE16 218 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 FBXO38Q6PIJ6 1188 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 C6orf15Q6UXA7 325 aaPredicted RBP25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 UNC5DQ6UXZ4 953 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 UNC5AQ6ZN44 842 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 OTOAQ7RTW8 1153 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 HOOK3Q86VS8 718 aa25.55■■□□□ 1.68
TSPAN4-217ENST00000527644 AGGF1Q8N302 714 aaeCLIP25.55■■□□□ 1.681e-7■■■■□ 23.7
TSPAN4-217ENST00000527644 GSDMBQ8TAX9 411 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms