RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 LILRB5O75023 590 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 SIX3O95343 332 aaPredicted RBP18.38■□□□□ 0.53
SMPD1-203ENST00000527275 NUDT1P36639 197 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 RIPK1Q13546 671 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 GTF2H3Q13889 308 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 TPRG1LQ5T0D9 272 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CRTC3Q6UUV7 619 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 FBXO39Q8N4B4 442 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CCDC28BQ9BUN5 200 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 FAM8A1Q9UBU6 413 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 FIS1Q9Y3D6 152 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CEP192Q8TEP8 1941 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 A8MUI8 341 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 UBFD1O14562 309 aaKnown RBP18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CHUKO15111 745 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 NUAK1O60285 661 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CEACAM5P06731 702 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 TSPAN8P19075 237 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CD27P26842 260 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 Q6ZSR6 202 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 ABI3BPQ7Z7G0 1075 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 ZNF514Q96K75 400 aaPredicted RBP18.38■□□□□ 0.53
SMPD1-203ENST00000527275 TNFRSF12AQ9NP84 129 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 MRPL40Q9NQ50 206 aaKnown RBP18.38■□□□□ 0.53
SMPD1-203ENST00000527275 GULP1Q9UBP9 304 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 GPR34Q9UPC5 381 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 LAMA1P25391 3075 aa18.38■□□□□ 0.53
SMPD1-203ENST00000527275 CCDC189A1A4V9 331 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 MAGEC1O60732 1142 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 FTH1P02794 183 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 AVPR2P30518 371 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 CDH13P55290 713 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 HSPA14Q0VDF9 509 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 SRSF5Q13243 272 aaKnown RBP18.37■□□□□ 0.53
SMPD1-203ENST00000527275 BCL7AQ4VC05 210 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 NXNQ6DKJ4 435 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 WDR5BQ86VZ2 330 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 ZBTB2Q8N680 514 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 OR13H1Q8NG92 308 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 PDLIM5Q96HC4 596 aaKnown RBP18.37■□□□□ 0.53
SMPD1-203ENST00000527275 LATS2Q9NRM7 1088 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 BAIAP2L1Q9UHR4 511 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 SLC17A4Q9Y2C5 497 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 TRAF6Q9Y4K3 522 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 LRRC14BA6NHZ5 514 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 GPR37L1O60883 481 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 ATP6V1G2O95670 118 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 HOXC4P09017 264 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-203ENST00000527275 AOAHP28039 575 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 PBLDP30039 288 aaPredicted RBP18.37■□□□□ 0.53
SMPD1-203ENST00000527275 BOP1Q14137 746 aaKnown RBP18.37■□□□□ 0.53
SMPD1-203ENST00000527275 SNCBQ16143 134 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 KIRREL3Q8IZU9 778 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 ELMO1Q92556 727 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 SLC6A18Q96N87 628 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 CCM2Q9BSQ5 444 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 FGF22Q9HCT0 170 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 AASDHPPTQ9NRN7 309 aa18.37■□□□□ 0.53
SMPD1-203ENST00000527275 THADAQ6YHU6 1953 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 MEI4A8MW99 385 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 THOP1P52888 689 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 YPEL5P62699 121 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 NFATC4Q14934 902 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 ACSBG2Q5FVE4 666 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 ARMCX6Q7L4S7 300 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 C11orf96Q7Z7L8 435 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 GPSM1Q86YR5 675 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 SLC22A18ASQ8N1D0 253 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 RBM15BQ8NDT2 890 aaKnown RBP18.36■□□□□ 0.53
SMPD1-203ENST00000527275 FAM13CQ8NE31 585 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 FBXO27Q8NI29 283 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 CMTM5Q96DZ9 223 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 MAELQ96JY0 434 aaKnown RBP18.36■□□□□ 0.53
SMPD1-203ENST00000527275 FAM126AQ9BYI3 521 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-203ENST00000527275 DUSP15Q9H1R2 295 aaPredicted RBP18.36■□□□□ 0.53
SMPD1-203ENST00000527275 TM7SF3Q9NS93 570 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 ZNHIT2Q9UHR6 403 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 MOSPD1Q9UJG1 213 aa18.36■□□□□ 0.53
SMPD1-203ENST00000527275 TSR3Q9UJK0 312 aaKnown RBP18.36■□□□□ 0.53
SMPD1-203ENST00000527275 GPR89AB7ZAQ6 455 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 SDHDO14521 159 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 SKAP2O75563 359 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 POP7O75817 140 aaKnown RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 GPR89BP0CG08 455 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 HTR1BP28222 390 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 EEF1DP29692 281 aaKnown RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 MNAT1P51948 309 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 KIAA1024LP59773 190 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 BTKQ06187 659 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 KLF10Q13118 480 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 PLA2G4EQ3MJ16 856 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 ENPP7Q6UWV6 458 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 LILRA3Q8N6C8 439 aaPredicted RBP18.35■□□□□ 0.53
SMPD1-203ENST00000527275 POU5F2Q8N7G0 328 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 OR56A4Q8NGH8 313 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 MCUR1Q96AQ8 359 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 MIR1-1HGQ9H1L0 117 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 FBXO4Q9UKT5 387 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 FAM86C2PA6NEL3 165 aa18.35■□□□□ 0.53
SMPD1-203ENST00000527275 NCF1BA6NI72 391 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms