RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 UBAP2Q5T6F2 1119 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 SPNS3Q6ZMD2 512 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 ADGRG6Q86SQ4 1221 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 TRIM74Q86UV6 250 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 Q8NA96 180 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 OR1E3Q8WZA6 343 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 PEX13Q92968 403 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 VPS35Q96QK1 796 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 EBNA1BP2Q99848 306 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 ANKZF1Q9H8Y5 726 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 FGF22Q9HCT0 170 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 ARFGAP3Q9NP61 516 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 MRPL40Q9NQ50 206 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 SLC17A4Q9Y2C5 497 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 TMEM98Q9Y2Y6 226 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 UTP11Q9Y3A2 253 aaKnown RBP10.69□□□□□ -0.7
NEDD8-204ENST00000526430 PKP3Q9Y446 797 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 PCDHGB7Q9Y5F8 929 aa10.69□□□□□ -0.7
NEDD8-204ENST00000526430 IGLV3-16A0A075B6K0 115 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 IGHV1OR21-1A0A087WYE8 117 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 MAGEB16A2A368 324 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 AP3B1O00203 1094 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 DNAJC6O75061 913 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 MTX2O75431 263 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 GOT2P00505 430 aaKnown RBP10.68□□□□□ -0.7
NEDD8-204ENST00000526430 RHOXF2BP0C7M4 288 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 MYBL2P10244 700 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 MC4RP32245 332 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 DLSTP36957 453 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 ELK3P41970 407 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 GPLD1P80108 840 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 SARNPP82979 210 aaKnown RBP10.68□□□□□ -0.7
NEDD8-204ENST00000526430 NFATC2Q13469 925 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 TESK1Q15569 626 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 DNTTIP2Q5QJE6 756 aaKnown RBP10.68□□□□□ -0.7
NEDD8-204ENST00000526430 ARMC3Q5W041 872 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 ZDHHC20Q5W0Z9 365 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 RAET1GQ6H3X3 334 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 JMJD6Q6NYC1 403 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-204ENST00000526430 TMEM71Q6P5X7 295 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 UNC5AQ6ZN44 842 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 HPS6Q86YV9 775 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 BBOF1Q8ND07 529 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 OR56A4Q8NGH8 313 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 NAT14Q8WUY8 206 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 GLYATL1Q969I3 302 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 RHOXF2Q9BQY4 288 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 ZSCAN5AQ9BUG6 496 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 SPATA16Q9BXB7 569 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 RAB17Q9H0T7 212 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 TMEM168Q9H0V1 697 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 RAD18Q9NS91 495 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 SMOXQ9NWM0 555 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 IL1RAPL1Q9NZN1 696 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 MARCH4Q9P2E8 410 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-204ENST00000526430 ATXN10Q9UBB4 475 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 KCND3Q9UK17 655 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 PCDHGA6Q9Y5G7 932 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 FAM169AQ9Y6X4 670 aa10.68□□□□□ -0.7
NEDD8-204ENST00000526430 CHUKO15111 745 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 DNAJB5O75953 348 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 USP1O94782 785 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PRAMEF1O95521 474 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 KELP23276 732 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 HADHAP40939 763 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 TNNT3P45378 269 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 GPX6P59796 221 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PDE1BQ01064 536 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PDIA2Q13087 525 aaKnown RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 HIF1AQ16665 826 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 BBS9Q3SYG4 887 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF658BQ4V348 819 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 GPRC6AQ5T6X5 926 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 STEAP4Q687X5 459 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PDPK2PQ6A1A2 396 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 NLRP9Q7RTR0 991 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 ARHGAP22Q7Z5H3 698 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 SNX20Q7Z614 316 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 C11orf96Q7Z7L8 435 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 LDB1Q86U70 411 aaPredicted RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 ANKMY2Q8IV38 441 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 ZNF547Q8IVP9 402 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 RASGEF1AQ8N9B8 481 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 DDHD1Q8NEL9 900 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PPHLN1Q8NEY8 458 aaKnown RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 STAMBPL1Q96FJ0 436 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 LURAP1Q96LR2 239 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 CTRCQ99895 268 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 SLC25A23Q9BV35 468 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 TRIM55Q9BYV6 548 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 ASB8Q9H765 288 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 WDR26Q9H7D7 661 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 TRIM39Q9HCM9 518 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 SPATS2LQ9NUQ6 558 aaKnown RBP10.67□□□□□ -0.7
NEDD8-204ENST00000526430 MOCS1Q9NZB8 636 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 TMEM9Q9P0T7 183 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PLEKHM1Q9Y4G2 1056 aa10.67□□□□□ -0.7
NEDD8-204ENST00000526430 PRSS21Q9Y6M0 314 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms