RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 A3GALT2U3KPV4 340 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 PTPRSQ13332 1948 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 AKAP13Q12802 2813 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 CENPEQ02224 2701 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 KNTC1P50748 2209 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 NBASA2RRP1 2371 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 OTOGQ6ZRI0 2925 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 ATMQ13315 3056 aa1.63□□□□□ -2.15
CD44-212ENST00000524922 LOXHD1Q8IVV2 1947 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 RP1L1Q8IWN7 2480 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 F8P00451 2351 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 LAMA1P25391 3075 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ANKHD1Q8IWZ3 2542 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 PATJQ8NI35 1801 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CTAGE9A4FU28 777 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ASPDHA6ND91 283 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ANTXRLA6NF34 631 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 LILRA5A6NI73 299 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 PCNX2A6NKB5 2137 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 B9A039 149 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 FAM72CH0Y354 149 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 STX16-NPEPL1H3BU86 382 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 M0QZ92 97 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 STX16O14662 325 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 RNF113AO15541 343 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 PAPSS1O43252 624 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 FGF17O60258 216 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 HBP1O60381 514 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 KRT38O76015 456 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 RHOBTB1O94844 696 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 TK1P04183 234 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 MYL1P05976 194 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ZFYP08048 801 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 CHRM4P08173 479 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 PATE4P0C8F1 98 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CTAGE8P0CG41 777 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SETSIPP0DME0 302 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SFTPCP11686 197 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CDH1P12830 882 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 GP1BBP13224 206 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 AKR1B1P15121 316 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ITGA2P17301 1181 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 EDN2P20800 178 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 S1PR1P21453 382 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SLC1A4P43007 532 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CXCL12P48061 93 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 NOVA1P51513 510 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 HSD17B4P51659 736 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ERVK11-1P61568 191 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 RPS6P62753 249 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 MRPS6P82932 125 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 CNTN2Q02246 1040 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SIM2Q14190 667 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 PTPN14Q15678 1187 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SHROOM1Q2M3G4 852 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 TCTN1Q2MV58 587 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 MAP9Q49MG5 647 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CCDC184Q52MB2 194 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 FAM72AQ5TYM5 149 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 FAM72DQ6L9T8 149 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ZSCAN25Q6NSZ9 544 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 DENND1BQ6P3S1 775 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CCNI2Q6ZMN8 369 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 ZNF497Q6ZNH5 498 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 STOX1Q6ZVD7 989 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 PLPPR4Q7Z2D5 763 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 NOXA1Q86UR1 476 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 FAM72BQ86X60 149 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CTAGE4Q8IX94 777 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 THNSL1Q8IYQ7 743 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SLC24A4Q8NFF2 622 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 TRIM58Q8NG06 486 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 BBS10Q8TAM1 723 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SLC20A1Q8WUM9 679 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 RAB40AQ8WXH6 277 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 THAP4Q8WY91 577 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 RND1Q92730 232 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ATP6V0A1Q93050 837 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ABTB1Q969K4 478 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 RILPL2Q969X0 211 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ELSPBP1Q96BH3 223 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 LGALS12Q96DT0 336 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 MTBPQ96DY7 904 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 FBXO17Q96EF6 278 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CCDC51Q96ER9 411 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 OR1F2PQ96R84 312 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 HNRNPABQ99729 332 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 EGFL8Q99944 293 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 SEMA3CQ99985 751 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 POLR3GLQ9BT43 218 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 MMTAG2Q9BU76 263 aaKnown RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 PRORYQ9H606 182 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 CWH43Q9H720 699 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 C8orf33Q9H7E9 229 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 TTC12Q9H892 705 aaPredicted RBP1.62□□□□□ -2.15
CD44-212ENST00000524922 PLEKHA5Q9HAU0 1116 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 UBN1Q9NPG3 1134 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 HCFC1R1Q9NWW0 138 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 MCM9Q9NXL9 1143 aa1.62□□□□□ -2.15
CD44-212ENST00000524922 ERAP1Q9NZ08 941 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms