RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 HHIPQ96QV1 700 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 DCUN1D5Q9BTE7 237 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 HAO1Q9UJM8 370 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 TRAF6Q9Y4K3 522 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 VEGFDO43915 354 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 CRHR1P34998 444 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 GDF10P55107 478 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 COMMD2Q86X83 199 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 DEFB107AQ8IZN7 70 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 AADATQ8N5Z0 425 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 TRAM1L1Q8N609 369 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 APOBEC3BQ9UH17 382 aaKnown RBP16.75■□□□□ 0.27
BEST1-203ENST00000524877 SLC9A8Q9Y2E8 581 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 FCHO1O14526 889 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 AP3D1O14617 1153 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 NUDT1P36639 197 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 SAMD4BQ5PRF9 694 aaKnown RBP16.75■□□□□ 0.27
BEST1-203ENST00000524877 ARHGAP40Q5TG30 622 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 IYDQ6PHW0 289 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 APOLD1Q96LR9 279 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 CITED4Q96RK1 184 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
BEST1-203ENST00000524877 CHMP1AQ9HD42 196 aaPredicted RBP16.75■□□□□ 0.27
BEST1-203ENST00000524877 SIT1Q9Y3P8 196 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 PCDHGA11Q9Y5H2 935 aa16.75■□□□□ 0.27
BEST1-203ENST00000524877 LPAL2Q16609 132 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 VPS26BQ4G0F5 336 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 TBCELQ5QJ74 424 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 TTC9BQ8N6N2 239 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 OR4E2Q8NGC2 313 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 KLF15Q9UIH9 416 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SNX13Q9Y5W8 968 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 CAPN14A8MX76 684 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 RFXANKO14593 260 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SCN2BO60939 215 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 PAK4O96013 591 aaPredicted RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 GKP32189 559 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 CYP4F3Q08477 520 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 KLHDC10Q6PID8 442 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 LRRTM3Q86VH5 581 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 TMEM145Q8NBT3 493 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 MYLIPQ8WY64 445 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SMPDL3AQ92484 453 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 BTBD9Q96Q07 612 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 ADGRE2Q9UHX3 823 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 NOTOA8MTQ0 251 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 STMND1H3BQB6 276 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SIN3BO75182 1162 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 TFPIP10646 304 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 CDH13P55290 713 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 OXR1Q8N573 874 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 ITFG1Q8TB96 612 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 OR52E6Q96RD3 313 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SNX7Q9UNH6 387 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 TMED5Q9Y3A6 229 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 MYH7P12883 1935 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 DCXO43602 365 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 TNFAIP8O95379 198 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SEC24AO95486 1093 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 PKNOX1P55347 436 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SIM2Q14190 667 aaPredicted RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 ZYG11AQ6WRX3 759 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 OR52L1Q8NGH7 329 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 MAFAQ8NHW3 353 aaPredicted RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 EXOSC8Q96B26 276 aaKnown RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 EQTNQ9NQ60 294 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SNRPB2P08579 225 aaKnown RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 ANXA4P09525 319 aaPredicted RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 SMIM11AP58511 58 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 RFTN2Q52LD8 501 aaPredicted RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 ARHGAP36Q6ZRI8 547 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 VN1R5Q7Z5H4 357 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 UMODL1-AS1Q8N2C9 162 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 LRRC15Q8TF66 581 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 SPATA7Q9P0W8 599 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 STOML2Q9UJZ1 356 aa16.74■□□□□ 0.27
BEST1-203ENST00000524877 RBMX2Q9Y388 322 aaKnown RBP16.74■□□□□ 0.27
BEST1-203ENST00000524877 LINC00854A0A1B0GVQ3 168 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 TSPAN4O14817 238 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 MID1O15344 667 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 HLA-DQA2P01906 255 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 BNC1Q01954 994 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 DPP10Q8N608 796 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 TFGQ92734 400 aaPredicted RBP16.73■□□□□ 0.27
BEST1-203ENST00000524877 SEPHS2Q99611 448 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 ARHGEF3Q9NR81 526 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 ABLIM1O14639 778 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 NUDT17P0C025 328 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 RPL10P27635 214 aaKnown RBP16.73■□□□□ 0.27
BEST1-203ENST00000524877 SEPHS1P49903 392 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 EPS8L2Q9H6S3 715 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 DNMT3BQ9UBC3 853 aaKnown RBP16.73■□□□□ 0.27
BEST1-203ENST00000524877 A0A1W2PRG6 482 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 ITGA2P17301 1181 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 NRG3P56975 720 aa16.73■□□□□ 0.27
BEST1-203ENST00000524877 ADAM17P78536 824 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms