RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 FAM169AQ9Y6X4 670 aa20.3■□□□□ 0.84
TRAPPC9-215ENST00000524162 SPTBP11277 2137 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 OR6C74A6NCV1 312 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 K7ENP7 123 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 KIF1CO43896 1103 aaKnown RBP20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 ZBTB11O95625 1053 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 PGAM1P18669 254 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 HSD11B2P80365 405 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 VAC14Q08AM6 782 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 HSPA14Q0VDF9 509 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 LONRF1Q17RB8 773 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 INO80CQ6PI98 192 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 FAM92BQ6ZTR7 304 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 CENPUQ71F23 418 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 GPR155Q7Z3F1 870 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 AMIGO1Q86WK6 493 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 ZFAND4Q86XD8 727 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 AGGF1Q8N302 714 aaeCLIP20.29■□□□□ 0.842e-7■■■■■ 56.9
TRAPPC9-215ENST00000524162 D2HGDHQ8N465 521 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 OR4E2Q8NGC2 313 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 GABPB2Q8TAK5 448 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 ZNF669Q96BR6 464 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 PITPNM3Q9BZ71 974 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 COMMD10Q9Y6G5 202 aa20.29■□□□□ 0.84
TRAPPC9-215ENST00000524162 PCM1Q15154 2024 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 IGHV5-51A0A0C4DH38 117 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 ATP1A2P50993 1020 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 ACY1Q03154 408 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 GBX1Q14549 363 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 KCTD19Q17RG1 926 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 IZUMO3Q5VZ72 239 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 OTOAQ7RTW8 1153 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 KLHL7Q8IXQ5 586 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 PDIK1LQ8N165 341 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 OTUD6BQ8N6M0 293 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 LSM14AQ8ND56 463 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 PHC3Q8NDX5 983 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 OR8K5Q8NH50 307 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 NKD1Q969G9 470 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 PMEPA1Q969W9 287 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 MAP3K3Q99759 626 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 EBNA1BP2Q99848 306 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 CHRNA10Q9GZZ6 450 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 MAD1L1Q9Y6D9 718 aa20.28■□□□□ 0.84
TRAPPC9-215ENST00000524162 UBA6A0AVT1 1052 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 C2orf74A8MZ97 194 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 S1PR4O95977 384 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 MAP4P27816 1152 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 CASQ1P31415 396 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 SEPHS1P49903 392 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 KPNA2P52292 529 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 TERF1P54274 439 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 PPP1CAP62136 330 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 THOC5Q13769 683 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 CTSL3PQ5NE16 218 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 HIBCHQ6NVY1 386 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 DCUN1D3Q8IWE4 304 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 ADGRF3Q8IZF5 1079 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 OR5AR1Q8NGP9 310 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 LKAAEAR1Q8TD35 194 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 SNF8Q96H20 258 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 FAM167BQ9BTA0 163 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 PDE7BQ9NP56 450 aa20.27■□□□□ 0.84
TRAPPC9-215ENST00000524162 KALRNO60229 2985 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 IQCF5A8MTL0 148 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 GOLGA8KD6RF30 607 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 GOLGA8TH3BQL2 631 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 SEC31AO94979 1220 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 DLGAP3O95886 979 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 PKMP14618 531 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 PRDX3P30048 256 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 EIF3BP55884 814 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 FRG1Q14331 258 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 BRD3Q15059 726 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 SPANXN3Q5MJ09 141 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 TMTC4Q5T4D3 741 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 ZNF470Q6ECI4 717 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 CCDC81Q6ZN84 652 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 GALNT7Q86SF2 657 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 PPP1R3BQ86XI6 285 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 VRK3Q8IV63 474 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 NLGN4XQ8N0W4 816 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 KRT222Q8N1A0 295 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 SIDT2Q8NBJ9 832 aaKnown RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 BBOF1Q8ND07 529 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 SPATA4Q8NEY3 305 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 NLGN4YQ8NFZ3 816 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 GSDMBQ8TAX9 411 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 JPH3Q8WXH2 748 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 OR6C1Q96RD1 312 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 HGH1Q9BTY7 390 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 APMAPQ9HDC9 416 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 ICKQ9UPZ9 632 aa20.26■□□□□ 0.83
TRAPPC9-215ENST00000524162 FAM187AA6NFU0 413 aa20.25■□□□□ 0.83
TRAPPC9-215ENST00000524162 AGRPO00253 132 aa20.25■□□□□ 0.83
TRAPPC9-215ENST00000524162 BTN3A3O00478 584 aa20.25■□□□□ 0.83
TRAPPC9-215ENST00000524162 BTN3A1O00481 513 aa20.25■□□□□ 0.83
TRAPPC9-215ENST00000524162 TTI1O43156 1089 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms