RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 GAGE5Q13069 117 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 GAGE6Q13070 117 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 PRKG2Q13237 762 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 RAB6CQ53S08 254 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 PDSS1Q5T2R2 415 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 KCTD8Q6ZWB6 473 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CEP97Q8IW35 865 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CTAGE4Q8IX94 777 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 C17orf53Q8N3J3 647 aaPredicted RBP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 KBTBD3Q8NAB2 608 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 OR13A1Q8NGR1 328 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 ZNF622Q969S3 477 aaKnown RBP eCLIP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 LINGO1Q96FE5 620 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 POLR3CQ9BUI4 534 aaPredicted RBP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 RAB6CQ9H0N0 254 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 DNAJC18Q9H819 358 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 MARCH4Q9P2E8 410 aaPredicted RBP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 KLHL9Q9P2J3 617 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 DNAJB4Q9UDY4 337 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 B3GALT5Q9Y2C3 310 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 ZNF541Q9H0D2 1346 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 CENPJQ9HC77 1338 aaPredicted RBP5.64□□□□□ -1.51
CPNE3-206ENST00000523469 BCORQ6W2J9 1755 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 SLX4Q8IY92 1834 aa5.64□□□□□ -1.51
CPNE3-206ENST00000523469 A0A1W2PQ09 198 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 TMEM178BH3BS89 294 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 J3QR06 171 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 CAPN9O14815 690 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 XPNPEP2O43895 674 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 CELF2O95319 508 aaKnown RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 ATP1A1P05023 1023 aaKnown RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 NR2F2P24468 414 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 SLC15A1P46059 708 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 HOXA1P49639 335 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 ZNF534Q76KX8 674 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 C1orf52Q8N6N3 182 aaKnown RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 RDM1Q8NG50 284 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 OR52I2Q8NH67 350 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 INPP4AQ96PE3 977 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 TSPYL4Q9UJ04 414 aa5.63□□□□□ -1.51
CPNE3-206ENST00000523469 FBXO2Q9UK22 296 aaPredicted RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 KIAA0100Q14667 2235 aaKnown RBP5.63□□□□□ -1.51
CPNE3-206ENST00000523469 LAMB4A4D0S4 1761 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 hCG_1807616A0A1W2PRN6 198 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 C15orf62A8K5M9 175 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 TMEM189-UBE2V1I3L0A0 370 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 SYNGR3O43761 229 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GFPT2O94808 682 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 IGLV2-11P01706 119 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CRYAAP02489 173 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 SELLP14151 372 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GCH1P30793 250 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CD81P60033 236 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 RPL24P83731 157 aaKnown RBP5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GAGE2BQ13066 116 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 PKN2Q16513 984 aaKnown RBP5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GAGE2EQ4V326 116 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CST9Q5W186 159 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GAGE2AQ6NT46 116 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 ZNF852Q6ZMS4 543 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GALNT5Q7Z7M9 940 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 SMIM29Q86T20 159 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CUZD1Q86UP6 607 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 NFE4Q86UQ8 179 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 LMNTD1Q8N9Z9 388 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 DMBX1Q8NFW5 382 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CALML4Q96GE6 196 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CEP295NLQ96MC4 621 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 DDOQ99489 341 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 EPYCQ99645 322 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 CCDC68Q9H2F9 335 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 TCF7L2Q9NQB0 619 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 GAGE2DQ9UEU5 116 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 YIPF1Q9Y548 306 aa5.62□□□□□ -1.51
CPNE3-206ENST00000523469 USP42Q9H9J4 1324 aaKnown RBP5.62□□□□□ -1.51
CPNE3-206ENST00000523469 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 CTDSP2O14595 271 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 DVL1O14640 695 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 NDUFS4O43181 175 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 WISP2O76076 250 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 MMP9P14780 707 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 PORP16435 677 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-206ENST00000523469 KDRP35968 1356 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 DVL1P1P54792 670 aaPredicted RBP5.61□□□□□ -1.51
CPNE3-206ENST00000523469 DLG2Q15700 870 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 SIRPB2Q5JXA9 342 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 SZT2Q5T011 3432 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 EVC2Q86UK5 1308 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 GALNT13Q8IUC8 556 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 TAGAPQ8N103 731 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 GBGT1Q8N5D6 347 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 CARMIL3Q8ND23 1372 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 NOTCH4Q99466 2003 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 HGH1Q9BTY7 390 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 MAP3K20Q9NYL2 800 aaKnown RBP5.61□□□□□ -1.51
CPNE3-206ENST00000523469 AMACRQ9UHK6 382 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 TMEM5Q9Y2B1 443 aa5.61□□□□□ -1.51
CPNE3-206ENST00000523469 TJP1Q07157 1748 aa5.6□□□□□ -1.51
CPNE3-206ENST00000523469 ANKRD26Q9UPS8 1709 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms