RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZNF385CQ66K41 422 aaPredicted RBP25.09■■□□□ 1.61
PVT1-219ENST00000523427 CCDC50Q8IVM0 306 aa25.09■■□□□ 1.61
PVT1-219ENST00000523427 QKIQ96PU8 341 aaKnown RBP eCLIP25.09■■□□□ 1.619e-7■■■□□ 15
PVT1-219ENST00000523427 COPS8Q99627 209 aa25.09■■□□□ 1.61
PVT1-219ENST00000523427 DHRS4Q9BTZ2 278 aa25.09■■□□□ 1.61
PVT1-219ENST00000523427 FAM60AQ9NP50 221 aa25.09■■□□□ 1.61
PVT1-219ENST00000523427 IRAK4Q9NWZ3 460 aa25.09■■□□□ 1.61
PVT1-219ENST00000523427 CDYLQ9Y232 598 aa25.09■■□□□ 1.61
PVT1-219ENST00000523427 CFAP99D6REC4 459 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 H7C0C1 242 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 ATP1B2P14415 290 aaPredicted RBP25.08■■□□□ 1.61
PVT1-219ENST00000523427 ATP5OP48047 213 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 GEMP55040 296 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 XIAPP98170 497 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 SARM1Q6SZW1 724 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 TMEM151BQ8IW70 566 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 SRRM1Q8IYB3 904 aaKnown RBP25.08■■□□□ 1.61
PVT1-219ENST00000523427 NXPE1Q8N323 547 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 CCDC42Q96M95 316 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 GOLPH3Q9H4A6 298 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 ZBTB20Q9HC78 741 aaPredicted RBP25.08■■□□□ 1.61
PVT1-219ENST00000523427 IFT80Q9P2H3 777 aaPredicted RBP25.08■■□□□ 1.61
PVT1-219ENST00000523427 NDOR1Q9UHB4 597 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 TRHDEQ9UKU6 1024 aa25.08■■□□□ 1.61
PVT1-219ENST00000523427 C5orf60A6NFR6 353 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 MSL3P1P0C860 447 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 RBL1P28749 1068 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 HADHAP40939 763 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 TAZQ16635 292 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 ADGRF3Q8IZF5 1079 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 ZADH2Q8N4Q0 377 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 INPP5DQ92835 1189 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 ULK4Q96C45 1275 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 IP6K3Q96PC2 410 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 HEMGNQ9BXL5 484 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 OR52A5Q9H2C5 316 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 TFB2MQ9H5Q4 396 aaKnown RBP25.07■■□□□ 1.6
PVT1-219ENST00000523427 ZNF552Q9H707 407 aaPredicted RBP25.07■■□□□ 1.6
PVT1-219ENST00000523427 P4HTMQ9NXG6 502 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 DHCR7Q9UBM7 475 aaKnown RBP25.07■■□□□ 1.6
PVT1-219ENST00000523427 NTNG1Q9Y2I2 539 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 LRBAP50851 2863 aa25.07■■□□□ 1.6
PVT1-219ENST00000523427 MDC1Q14676 2089 aaKnown RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 HCRTR1O43613 425 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 ANXA9O76027 345 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 CTSBP07858 339 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 ITGALP20701 1170 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 CDKN1CP49918 316 aaPredicted RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 TFDP3Q5H9I0 405 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 ZNF449Q6P9G9 518 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 ZNF655Q8N720 491 aaPredicted RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 C19orf47Q8N9M1 422 aaKnown RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 TTC13Q8NBP0 860 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 TFGQ92734 400 aaPredicted RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 DNAJC7Q99615 494 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 C17orf62Q9BQA9 187 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 GORASP1Q9BQQ3 440 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 GBA3Q9H227 469 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 MVB12BQ9H7P6 319 aa25.06■■□□□ 1.6
PVT1-219ENST00000523427 NHEJ1Q9H9Q4 299 aaPredicted RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 TEP1Q99973 2627 aaKnown RBP25.06■■□□□ 1.6
PVT1-219ENST00000523427 CCDC88CQ9P219 2028 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 hCG_1818297A0A087WSY0 165 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 CRTAMO95727 393 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 CCDC181Q5TID7 509 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 SPESP1Q6UW49 350 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 CUZD1Q86UP6 607 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 TXLNGQ9NUQ3 528 aa25.05■■□□□ 1.6
PVT1-219ENST00000523427 C17orf113A0A1B0GUU1 675 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 ZRANB2O95218 330 aaKnown RBP eCLIP25.04■■□□□ 1.6
PVT1-219ENST00000523427 PRSS56P0CW18 603 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 DCDP81605 110 aaKnown RBP25.04■■□□□ 1.6
PVT1-219ENST00000523427 ZIC1Q15915 447 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 CYP2A13Q16696 494 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 ITPRIPL1Q6GPH6 555 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 RANBP10Q6VN20 620 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 TAS2R42Q7RTR8 314 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 SNX20Q7Z614 316 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 CLDN19Q8N6F1 224 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 TM9SF4Q92544 642 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 GBP5Q96PP8 586 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 ICKQ9UPZ9 632 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 AP1M2Q9Y6Q5 423 aa25.04■■□□□ 1.6
PVT1-219ENST00000523427 MACROD2A1Z1Q3 448 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 HACD1B0YJ81 288 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 PSTPIP1O43586 416 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 CNOT3O75175 753 aaKnown RBP25.03■■□□□ 1.6
PVT1-219ENST00000523427 TPM3P06753 285 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 UGT2B7P16662 529 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 ITGA3P26006 1051 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 PSMB4P28070 264 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 MC4RP32245 332 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 MARCKSL1P49006 195 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 BOP1Q14137 746 aaKnown RBP25.03■■□□□ 1.6
PVT1-219ENST00000523427 SPARCL1Q14515 664 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 BRD3Q15059 726 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 IGFL3Q6UXB1 125 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 PPP1R32Q7Z5V6 425 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 OR2Y1Q8NGV0 311 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 HEXDCQ8WVB3 486 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms