RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SLC38A9Q8NBW4 561 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 SGSM3Q96HU1 749 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 FCRL4Q96PJ5 515 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 TUBB2BQ9BVA1 445 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 TREX1Q9NSU2 369 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 TTC7AQ9ULT0 858 aaPredicted RBP18.13■□□□□ 0.49
SPIDR-220ENST00000522900 ASF1AQ9Y294 204 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 BOD1L1Q8NFC6 3051 aa18.13■□□□□ 0.49
SPIDR-220ENST00000522900 ZIC2O95409 532 aaPredicted RBP18.12■□□□□ 0.49
SPIDR-220ENST00000522900 MGAT1P26572 445 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 ERV3-1Q14264 604 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 TMTC4Q5T4D3 741 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 TTC27Q6P3X3 843 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 CES3Q6UWW8 571 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 C4orf22Q6V702 233 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 UNC5AQ6ZN44 842 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 VRK3Q8IV63 474 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 PEX13Q92968 403 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 MS4A14Q96JA4 679 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 CATSPER2Q96P56 530 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 TTC1Q99614 292 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 PITPNM3Q9BZ71 974 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 ACTR10Q9NZ32 417 aa18.12■□□□□ 0.49
SPIDR-220ENST00000522900 TDRKHQ9Y2W6 561 aaKnown RBP18.12■□□□□ 0.49
SPIDR-220ENST00000522900 C2orf74A8MZ97 194 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 MATN2O00339 956 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 CD3EAPO15446 510 aaKnown RBP18.11■□□□□ 0.49
SPIDR-220ENST00000522900 SCRG1O75711 98 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 MT-ND3P03897 115 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 SFTPCP11686 197 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 CCR10P46092 362 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 NPY2RP49146 381 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 MC1RQ01726 317 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 ABRQ12979 859 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 KCNAB2Q13303 367 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 DNASE1L3Q13609 305 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 SYTL3Q4VX76 610 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 TMEM135Q86UB9 458 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 TRIM73Q86UV7 250 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 TMEM126BQ8IUX1 230 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 TBC1D21Q8IYX1 336 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 KRT222Q8N1A0 295 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 TRAPPC9Q96Q05 1148 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 SLC25A18Q9H1K4 315 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 CATSPERZQ9NTU4 200 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 SYBUQ9NX95 663 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 SPHK1Q9NYA1 384 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 BFARQ9NZS9 450 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 PLAGL1Q9UM63 463 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 CDYLQ9Y232 598 aa18.11■□□□□ 0.49
SPIDR-220ENST00000522900 J3QKU1 62 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 AVILO75366 819 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 VPS41P49754 854 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 HSPA14Q0VDF9 509 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 GPS2Q13227 327 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 CRTC2Q53ET0 693 aaPredicted RBP18.1■□□□□ 0.49
SPIDR-220ENST00000522900 LCN10Q6JVE6 187 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 LRRC8BQ6P9F7 803 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 OR1L3Q8NH93 324 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 OR5K2Q8NHB8 316 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 MFSD3Q96ES6 412 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 OR2A14Q96R47 310 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 CARD6Q9BX69 1037 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 AP1M1Q9BXS5 423 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 FAM117AQ9C073 453 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 IL22Q9GZX6 179 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 HOMER3Q9NSC5 361 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 ANAPC5Q9UJX4 755 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 KCND3Q9UK17 655 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 PCDHGA6Q9Y5G7 932 aa18.1■□□□□ 0.49
SPIDR-220ENST00000522900 PIPSLA2A3N6 862 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 TMEM150CB9EJG8 249 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 NRDCO43847 1150 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 SLC28A2O43868 658 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 GPC4O75487 556 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 CREG1O75629 220 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 UGT2B7P16662 529 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 ARNTP27540 789 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 RPS18P62269 152 aaKnown RBP18.09■□□□□ 0.49
SPIDR-220ENST00000522900 PLOD1Q02809 727 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-220ENST00000522900 ZNF789Q5FWF6 425 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 SPESP1Q6UW49 350 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 CDHR3Q6ZTQ4 885 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 PRICKLE2Q7Z3G6 844 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 REXO1L1PQ8IX06 675 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 SLC22A15Q8IZD6 547 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 RASGEF1CQ8N431 466 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 LMNTD1Q8N9Z9 388 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 OR8K5Q8NH50 307 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 FLVCR1-AS1Q8TAF5 88 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 APOBEC4Q8WW27 367 aaKnown RBP18.09■□□□□ 0.49
SPIDR-220ENST00000522900 KIFC1Q9BW19 673 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 P2RY12Q9H244 342 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 ADNPQ9H2P0 1102 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 FAM60AQ9NP50 221 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 LATS2Q9NRM7 1088 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 CIDEBQ9UHD4 219 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 POLG2Q9UHN1 485 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 JRKLQ9Y4A0 524 aa18.09■□□□□ 0.49
SPIDR-220ENST00000522900 PCDHB3Q9Y5E6 796 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms